RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 TRIM72Q6ZMU5 477 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 PHF13Q86YI8 300 aaPredicted RBP17.59■□□□□ 0.41
SPG11-215ENST00000559193 IFT74Q96LB3 600 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 RMDN2Q96LZ7 410 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 MAGEB18Q96M61 343 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 HAPLN2Q9GZV7 340 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 RPAP3Q9H6T3 665 aaPredicted RBP17.59■□□□□ 0.41
SPG11-215ENST00000559193 KIAA1586Q9HCI6 787 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 PCDHB4Q9Y5E5 795 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 EZRP15311 586 aaKnown RBP17.59■□□□□ 0.41
SPG11-215ENST00000559193 MKRN3Q13064 507 aaKnown RBP17.59■□□□□ 0.41
SPG11-215ENST00000559193 MIS18BP1Q6P0N0 1132 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 XRRA1Q6P2D8 792 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 TMEM270Q6UE05 265 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 CRELD2Q6UXH1 353 aaPredicted RBP17.59■□□□□ 0.41
SPG11-215ENST00000559193 ARHGEF18Q6ZSZ5 1173 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 RPAINQ86UA6 219 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 ZCCHC9Q8N567 271 aaKnown RBP17.59■□□□□ 0.41
SPG11-215ENST00000559193 FITM2Q8N6M3 262 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 GLIS1Q8NBF1 620 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 ATG4CQ96DT6 458 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 RBM15Q96T37 977 aaKnown RBP eCLIP17.59■□□□□ 0.419e-7■■■■□ 22.2
SPG11-215ENST00000559193 CXorf56Q9H5V9 222 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 MRPL47Q9HD33 250 aaKnown RBP17.59■□□□□ 0.41
SPG11-215ENST00000559193 PNMA3Q9UL41 463 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 ACTL7BQ9Y614 415 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 ZNF541Q9H0D2 1346 aa17.59■□□□□ 0.41
SPG11-215ENST00000559193 VWA5AO00534 786 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 PSAPP07602 524 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 ABHD2P08910 425 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 SSR1P43307 286 aaKnown RBP17.58■□□□□ 0.41
SPG11-215ENST00000559193 MAGEA4P43358 317 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 COPS2P61201 443 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 MGAT5Q09328 741 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 ZNF268Q14587 947 aaPredicted RBP17.58■□□□□ 0.41
SPG11-215ENST00000559193 TMED2Q15363 201 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 CYP4F22Q6NT55 531 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 GBP7Q8N8V2 638 aaPredicted RBP17.58■□□□□ 0.41
SPG11-215ENST00000559193 MAML1Q92585 1016 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 TBC1D31Q96DN5 1066 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 NKIRAS1Q9NYS0 192 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 AGO2Q9UKV8 859 aaKnown RBP17.58■□□□□ 0.41
SPG11-215ENST00000559193 STYXL1Q9Y6J8 313 aa17.58■□□□□ 0.41
SPG11-215ENST00000559193 IGF2BP3O00425 579 aaKnown RBP eCLIP17.58■□□□□ 0.4
SPG11-215ENST00000559193 TLR3O15455 904 aaKnown RBP17.58■□□□□ 0.4
SPG11-215ENST00000559193 TCF4P15884 667 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 FOXN2P32314 431 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 ATP13A4Q4VNC1 1196 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 ZBTB41Q5SVQ8 909 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 GSTA5Q7RTV2 222 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 RBBP8NLQ8NC74 664 aaPredicted RBP17.58■□□□□ 0.4
SPG11-215ENST00000559193 AGBL3Q8NEM8 1001 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 VCPIP1Q96JH7 1222 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 TEPSINQ96N21 525 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 CCDC77Q9BR77 488 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 FHDC1Q9C0D6 1143 aaPredicted RBP17.58■□□□□ 0.4
SPG11-215ENST00000559193 SCINQ9Y6U3 715 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 NFASCO94856 1347 aa17.58■□□□□ 0.4
SPG11-215ENST00000559193 GSTTP1A0A1W2PQM5 241 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 PI4K2BG5E9Z4 385 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 LIASO43766 372 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 DKC1O60832 514 aaKnown RBP eCLIP17.57■□□□□ 0.4
SPG11-215ENST00000559193 TAC1P20366 129 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 GCAP28676 217 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 ALDH5A1P51649 535 aaPredicted RBP17.57■□□□□ 0.4
SPG11-215ENST00000559193 NFX1Q12986 1120 aaKnown RBP17.57■□□□□ 0.4
SPG11-215ENST00000559193 STRN3Q13033 797 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 RTKN2Q8IZC4 609 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 ANKLE1Q8NAG6 615 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 GIMAP7Q8NHV1 300 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 ZBTB45Q96K62 511 aaPredicted RBP17.57■□□□□ 0.4
SPG11-215ENST00000559193 RXFP1Q9HBX9 757 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 JPH1Q9HDC5 661 aaPredicted RBP17.57■□□□□ 0.4
SPG11-215ENST00000559193 RASA4BC9J798 803 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 H0YCG3 227 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 RASA4O43374 803 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 KRT10P13645 584 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 WDR4P57081 412 aaKnown RBP17.57■□□□□ 0.4
SPG11-215ENST00000559193 C1QBPQ07021 282 aaKnown RBP17.57■□□□□ 0.4
SPG11-215ENST00000559193 MTFR1Q15390 333 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 MTERF2Q49AM1 385 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 PPP1R21Q6ZMI0 780 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 FEZF2Q8TBJ5 459 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 PLCD4Q9BRC7 762 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 DNPEPQ9ULA0 475 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 NUB1Q9Y5A7 615 aa17.57■□□□□ 0.4
SPG11-215ENST00000559193 LOC102724159A0A0B4J2E5 919 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 MAFGO15525 162 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 ZSCAN5DPP0CG00 497 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 ALADP13716 330 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 NF2P35240 595 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 ACTR2P61160 394 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 RPL7AP62424 266 aaKnown RBP17.56■□□□□ 0.4
SPG11-215ENST00000559193 EMC2Q15006 297 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 PWP2Q15269 919 aaKnown RBP17.56■□□□□ 0.4
SPG11-215ENST00000559193 RIBC1Q8N443 379 aaPredicted RBP17.56■□□□□ 0.4
SPG11-215ENST00000559193 KIF2BQ8N4N8 673 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 FOXP3Q9BZS1 431 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 SAYSD1Q9NPB0 183 aa17.56■□□□□ 0.4
SPG11-215ENST00000559193 RBAKQ9NYW8 714 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms