RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 SYCP3Q8IZU3 236 aa16.8■□□□□ 0.28
CSHL1-208ENST00000558609 DHX58Q96C10 678 aa16.8■□□□□ 0.28
CSHL1-208ENST00000558609 FGFBP2Q9BYJ0 223 aa16.8■□□□□ 0.28
CSHL1-208ENST00000558609 TRIM9Q9C026 710 aa16.8■□□□□ 0.28
CSHL1-208ENST00000558609 TMEM206Q9H813 350 aa16.8■□□□□ 0.28
CSHL1-208ENST00000558609 DNMT3BQ9UBC3 853 aaKnown RBP16.8■□□□□ 0.28
CSHL1-208ENST00000558609 RCOR1Q9UKL0 485 aa16.8■□□□□ 0.28
CSHL1-208ENST00000558609 PCDHA7Q9UN72 937 aa16.8■□□□□ 0.28
CSHL1-208ENST00000558609 DUSP12Q9UNI6 340 aa16.8■□□□□ 0.28
CSHL1-208ENST00000558609 ANK1P16157 1881 aa16.8■□□□□ 0.28
CSHL1-208ENST00000558609 ANHXE9PGG2 379 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 PRRG1O14668 218 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 PPEF2O14830 753 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 IL18RAPO95256 599 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 LDHAP00338 332 aaKnown RBP16.79■□□□□ 0.28
CSHL1-208ENST00000558609 PDGFBP01127 241 aaPredicted RBP16.79■□□□□ 0.28
CSHL1-208ENST00000558609 TYMPP19971 482 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 ME1P48163 572 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 PTPN5P54829 565 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 DNM1Q05193 864 aaKnown RBP16.79■□□□□ 0.28
CSHL1-208ENST00000558609 NT5DC4Q86YG4 428 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 SLC44A3Q8N4M1 653 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 RSAD2Q8WXG1 361 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 C7orf25Q9BPX7 421 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 MAGEF1Q9HAY2 307 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 AVENQ9NQS1 362 aaPredicted RBP16.79■□□□□ 0.28
CSHL1-208ENST00000558609 HCFC1R1Q9NWW0 138 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 AFF4Q9UHB7 1163 aaKnown RBP16.79■□□□□ 0.28
CSHL1-208ENST00000558609 CDH7Q9ULB5 785 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 KCNH3Q9ULD8 1083 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 TIMM13Q9Y5L4 95 aaPredicted RBP16.79■□□□□ 0.28
CSHL1-208ENST00000558609 CFAP54Q96N23 3096 aa16.79■□□□□ 0.28
CSHL1-208ENST00000558609 POLR2DO15514 142 aaKnown RBP16.78■□□□□ 0.28
CSHL1-208ENST00000558609 PRPF6O94906 941 aaKnown RBP16.78■□□□□ 0.28
CSHL1-208ENST00000558609 SEC24AO95486 1093 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 LRG1P02750 347 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 AVPR2P30518 371 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 HTR4Q13639 388 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 PABPC1LQ4VXU2 614 aaKnown RBP16.78■□□□□ 0.28
CSHL1-208ENST00000558609 RESP18Q5W5W9 173 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 STXBP4Q6ZWJ1 553 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 USP37Q86T82 979 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 ITFG1Q8TB96 612 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 FGF13Q92913 245 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 SENP8Q96LD8 212 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 FAM213AQ9BRX8 229 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 CYP4F11Q9HBI6 524 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 DPP3Q9NY33 737 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 FAM13BQ9NYF5 915 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 NOTCH4Q99466 2003 aa16.78■□□□□ 0.28
CSHL1-208ENST00000558609 OR6C75A6NL08 312 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 SPTLC1O15269 473 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 CYP11A1P05108 521 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 PTPN2P17706 415 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 VCPP55072 806 aaKnown RBP16.77■□□□□ 0.28
CSHL1-208ENST00000558609 ADCY1Q08828 1119 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 OVOS1Q6IE37 1185 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 RNF19BQ6ZMZ0 732 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 BRSK2Q8IWQ3 736 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 EFCAB13Q8IY85 973 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 ZSWIM2Q8NEG5 633 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 SAAL1Q96ER3 474 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 PRRX2Q99811 253 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 CBWD1Q9BRT8 395 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 FAM86C1Q9NVL1 165 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 INSL5Q9Y5Q6 135 aa16.77■□□□□ 0.28
CSHL1-208ENST00000558609 KIAA0391O15091 583 aaKnown RBP16.76■□□□□ 0.27
CSHL1-208ENST00000558609 EIF3DO15371 548 aaKnown RBP eCLIP16.76■□□□□ 0.27
CSHL1-208ENST00000558609 NARSO43776 548 aaKnown RBP16.76■□□□□ 0.27
CSHL1-208ENST00000558609 EXTL3O43909 919 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 RHOP08100 348 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 ODC1P11926 461 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 CPB1P15086 417 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 ASIC1P78348 528 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 MYBPC2Q14324 1141 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 GLIS3Q8NEA6 775 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 HPS3Q969F9 1004 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 PYM1Q9BRP8 204 aaKnown RBP16.76■□□□□ 0.27
CSHL1-208ENST00000558609 WNT16Q9UBV4 365 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 ZDHHC9Q9Y397 364 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 MRPS23Q9Y3D9 190 aaKnown RBP16.76■□□□□ 0.27
CSHL1-208ENST00000558609 KMT2EQ8IZD2 1858 aa16.76■□□□□ 0.27
CSHL1-208ENST00000558609 SCN1AP35498 2009 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 SRFP11831 508 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 HOXD13P35453 343 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 TAF6P49848 677 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 NUBP1P53384 320 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 WNT7BP56706 349 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 EHHADHQ08426 723 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 GPR17Q13304 367 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 ARMCX5Q6P1M9 558 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 UNC13DQ70J99 1090 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 MTSS1LQ765P7 747 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 EPM2AIP1Q7L775 607 aaPredicted RBP16.75■□□□□ 0.27
CSHL1-208ENST00000558609 NPAS3Q8IXF0 933 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 ZNF507Q8TCN5 953 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
CSHL1-208ENST00000558609 BORCS6Q96GS4 357 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 PCIF1Q9H4Z3 704 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 RBAKQ9NYW8 714 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms