RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SUSD3Q96L08 255 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 NAT10Q9H0A0 1025 aaKnown RBP18.8■□□□□ 0.6
TPM1-214ENST00000558544 SAMSN1Q9NSI8 373 aaKnown RBP18.8■□□□□ 0.6
TPM1-214ENST00000558544 MTCH2Q9Y6C9 303 aa18.8■□□□□ 0.6
TPM1-214ENST00000558544 VNN1O95497 513 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 CST3P01034 146 aaPredicted RBP18.79■□□□□ 0.6
TPM1-214ENST00000558544 FOSL2P15408 326 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 PNPLA4P41247 253 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 MXI1P50539 228 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 MYL5Q02045 173 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 TRPC3Q13507 836 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 SMC1AQ14683 1233 aaKnown RBP18.79■□□□□ 0.6
TPM1-214ENST00000558544 PTPN14Q15678 1187 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 ZACNQ401N2 412 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 KIAA1841Q6NSI8 718 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.79■□□□□ 0.6
TPM1-214ENST00000558544 C15orf39Q6ZRI6 1047 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 TRIM59Q8IWR1 403 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 MICALL1Q8N3F8 863 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 TTPALQ9BTX7 342 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 TMEM8AQ9HCN3 771 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 CHST7Q9NS84 486 aa18.79■□□□□ 0.6
TPM1-214ENST00000558544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.78■□□□□ 0.6
TPM1-214ENST00000558544 HIDE1A8MVS5 230 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 STX10O60499 249 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 CLSTN1O94985 981 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 FGFR3P22607 806 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 GTF2H1P32780 548 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 PIK3CAP42336 1068 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 MYL6P60660 151 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 DSG1Q02413 1049 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 MYO1EQ12965 1108 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 NCOA4Q13772 614 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 FAM114A1Q8IWE2 563 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 AOPEPQ8N6M6 819 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 RIN2Q8WYP3 895 aaPredicted RBP18.78■□□□□ 0.6
TPM1-214ENST00000558544 HPDLQ96IR7 371 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 SENP8Q96LD8 212 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 ANP32EQ9BTT0 268 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 NGRNQ9NPE2 291 aaKnown RBP18.78■□□□□ 0.6
TPM1-214ENST00000558544 LMCD1Q9NZU5 365 aa18.78■□□□□ 0.6
TPM1-214ENST00000558544 KPNA7A9QM74 516 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 M0QZQ0 153 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 SYN3O14994 580 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 CXCL14O95715 111 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 HLA-DRAP01903 254 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 POU3F3P20264 500 aaPredicted RBP18.77■□□□□ 0.6
TPM1-214ENST00000558544 BMS1Q14692 1282 aaKnown RBP18.77■□□□□ 0.6
TPM1-214ENST00000558544 CBWD6Q4V339 395 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 CBWD3Q5JTY5 395 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 CBWD5Q5RIA9 395 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 KIAA0319Q5VV43 1072 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 KRT39Q6A163 491 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 PDE12Q6L8Q7 609 aaKnown RBP18.77■□□□□ 0.6
TPM1-214ENST00000558544 PRSS55Q6UWB4 352 aaPredicted RBP18.77■□□□□ 0.6
TPM1-214ENST00000558544 ADGRD2Q7Z7M1 963 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 TAS1R2Q8TE23 839 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 ELMO3Q96BJ8 720 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 BPIFA3Q9BQP9 254 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 MRPL17Q9NRX2 175 aaKnown RBP18.77■□□□□ 0.6
TPM1-214ENST00000558544 MAGEC2Q9UBF1 373 aaPredicted RBP18.77■□□□□ 0.6
TPM1-214ENST00000558544 PCDHB8Q9UN66 801 aa18.77■□□□□ 0.6
TPM1-214ENST00000558544 TIMM13Q9Y5L4 95 aaPredicted RBP18.77■□□□□ 0.6
TPM1-214ENST00000558544 C2orf71A6NGG8 1288 aa18.76■□□□□ 0.59
TPM1-214ENST00000558544 CYB561D2O14569 222 aa18.76■□□□□ 0.59
TPM1-214ENST00000558544 ODC1P11926 461 aa18.76■□□□□ 0.59
TPM1-214ENST00000558544 PAX3P23760 479 aa18.76■□□□□ 0.59
TPM1-214ENST00000558544 MTIF2P46199 727 aaKnown RBP18.76■□□□□ 0.59
TPM1-214ENST00000558544 ZNF165P49910 485 aa18.76■□□□□ 0.59
TPM1-214ENST00000558544 NCAPHQ15003 741 aa18.76■□□□□ 0.59
TPM1-214ENST00000558544 ZNF699Q32M78 642 aa18.76■□□□□ 0.59
TPM1-214ENST00000558544 NSUN3Q9H649 340 aaKnown RBP18.76■□□□□ 0.59
TPM1-214ENST00000558544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.76■□□□□ 0.59
TPM1-214ENST00000558544 FANCLQ9NW38 375 aa18.76■□□□□ 0.59
TPM1-214ENST00000558544 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.76■□□□□ 0.59
TPM1-214ENST00000558544 SNX9Q9Y5X1 595 aa18.76■□□□□ 0.59
TPM1-214ENST00000558544 MTCL1Q9Y4B5 1905 aaKnown RBP18.76■□□□□ 0.59
TPM1-214ENST00000558544 KCNJ18B7U540 433 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 ATICP31939 592 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 FMO5P49326 533 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 MYL7Q01449 175 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 KCNH2Q12809 1159 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 KCNJ12Q14500 433 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 PSMD5Q16401 504 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 TCEAL5Q5H9L2 206 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 VARS2Q5ST30 1063 aaKnown RBP18.75■□□□□ 0.59
TPM1-214ENST00000558544 CDKAL1Q5VV42 579 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 DHX40Q8IX18 779 aaKnown RBP18.75■□□□□ 0.59
TPM1-214ENST00000558544 MRPL43Q8N983 215 aaKnown RBP18.75■□□□□ 0.59
TPM1-214ENST00000558544 APPL2Q8NEU8 664 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 LNX1Q8TBB1 728 aaPredicted RBP18.75■□□□□ 0.59
TPM1-214ENST00000558544 PIK3R5Q8WYR1 880 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 XYLT2Q9H1B5 865 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 SSX2IPQ9Y2D8 614 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 IRAK3Q9Y616 596 aa18.75■□□□□ 0.59
TPM1-214ENST00000558544 LILRB3O75022 631 aa18.74■□□□□ 0.59
TPM1-214ENST00000558544 LRRN2O75325 713 aa18.74■□□□□ 0.59
TPM1-214ENST00000558544 STAU1O95793 577 aaKnown RBP18.74■□□□□ 0.59
TPM1-214ENST00000558544 AFPP02771 609 aaKnown RBP18.74■□□□□ 0.59
TPM1-214ENST00000558544 RPL17P18621 184 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms