RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 FAM83AQ86UY5 434 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 TMEM57Q8N5G2 664 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 C1orf162Q8NEQ5 155 aaPredicted RBP3.75□□□□□ -1.81
HERC1-203ENST00000558532 ZNF397Q8NF99 534 aaPredicted RBP3.75□□□□□ -1.81
HERC1-203ENST00000558532 OR7D4Q8NG98 312 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 OR2I1PQ8NGU4 316 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 FATE1Q969F0 183 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 SLC2A13Q96QE2 648 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 PLEKHF1Q96S99 279 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 KRTAP4-5Q9BYR2 181 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 KCNH6Q9H252 994 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 EPC1Q9H2F5 836 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 GREM2Q9H772 168 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 PCDH12Q9NPG4 1184 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 RBM12Q9NTZ6 932 aaKnown RBP3.75□□□□□ -1.81
HERC1-203ENST00000558532 FEZ2Q9UHY8 353 aaPredicted RBP3.75□□□□□ -1.81
HERC1-203ENST00000558532 TRHDEQ9UKU6 1024 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 COL4A3BPQ9Y5P4 624 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 GPR45Q9Y5Y3 372 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 ADGRL3Q9HAR2 1447 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 ATRNL1Q5VV63 1379 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 PNPLA6Q8IY17 1366 aa3.75□□□□□ -1.81
HERC1-203ENST00000558532 KIF20BQ96Q89 1820 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 CCDC171Q6TFL3 1326 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 PIK3C2BO00750 1634 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 TCHHQ07283 1943 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 VGLL3A8MV65 326 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 GOLGA6L6A8MZA4 724 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 GABRDO14764 452 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 IPO8O15397 1037 aaKnown RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 AKAP8O43823 692 aaKnown RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 FZD7O75084 574 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 KATNA1O75449 491 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 ZFYVE9O95405 1425 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 MT-CO1P00395 513 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 PTMAP06454 111 aaKnown RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 H2AFXP16104 143 aaPredicted RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 ZFP36P26651 326 aaKnown RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 ECHS1P30084 290 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 GUCY1A2P33402 732 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 SREBF1P36956 1147 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 KCNJ4P48050 445 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 SLC6A9P48067 706 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 FLT3LGP49771 235 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 RBM6P78332 1123 aaKnown RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 MGAT2Q10469 447 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 CPSF1Q10570 1443 aaKnown RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 TUBA3CQ13748 450 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 ABCB5Q2M3G0 1257 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 LSM12Q3MHD2 195 aaKnown RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 RABL3Q5HYI8 236 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 DNTTIP2Q5QJE6 756 aaKnown RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 SYDE2Q5VT97 1194 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 TUBA3EQ6PEY2 450 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 ZNF572Q7Z3I7 529 aaPredicted RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 SYT12Q8IV01 421 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 ZGPATQ8N5A5 531 aaKnown RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 IQUBQ8NA54 791 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 SLC16A11Q8NCK7 471 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 FBXO18Q8NFZ0 1043 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 SLC35B2Q8TB61 432 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 GPATCH3Q96I76 525 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 ZNF341Q9BYN7 854 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 UBXN6Q9BZV1 441 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 CCDC8Q9H0W5 538 aaPredicted RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 CSRNP2Q9H175 543 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 TMPRSS5Q9H3S3 457 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 TTC12Q9H892 705 aaPredicted RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 BCO1Q9HAY6 547 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 SMC4Q9NTJ3 1288 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 PARPBPQ9NWS1 579 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 GPRC5BQ9NZH0 403 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.74□□□□□ -1.81
HERC1-203ENST00000558532 TUBD1Q9UJT1 453 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 PYCARDQ9ULZ3 195 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 SIK3Q9Y2K2 1263 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 PAXBP1Q9Y5B6 917 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 PCDHGA2Q9Y5H1 932 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 NEXMIFQ5QGS0 1516 aa3.74□□□□□ -1.81
HERC1-203ENST00000558532 CD163L1Q9NR16 1453 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 PTPRCP08575 1304 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 SALL3Q9BXA9 1300 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 YTHDC2Q9H6S0 1430 aaKnown RBP3.73□□□□□ -1.81
HERC1-203ENST00000558532 B5MCH6 92 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 LEFTY2O00292 366 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 AP5Z1O43299 807 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 PCDHGA12O60330 932 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 FAM20BO75063 409 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 ZNF202O95125 648 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 FSHBP01225 129 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 RBP3P10745 1247 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 ALOX15P16050 662 aaPredicted RBP3.73□□□□□ -1.81
HERC1-203ENST00000558532 MX1P20591 662 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 NR4A1P22736 598 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 EXOSC9Q06265 439 aaKnown RBP3.73□□□□□ -1.81
HERC1-203ENST00000558532 KLF10Q13118 480 aa3.73□□□□□ -1.81
HERC1-203ENST00000558532 RBM43Q6ZSC3 357 aaKnown RBP3.73□□□□□ -1.81
HERC1-203ENST00000558532 PDZD4Q76G19 769 aaPredicted RBP3.73□□□□□ -1.81
HERC1-203ENST00000558532 ITPRIPQ8IWB1 547 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms