RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 DSTYKQ6XUX3 929 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 FAM114A1Q8IWE2 563 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 C3orf58Q8NDZ4 430 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 CXorf38Q8TB03 319 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 MTMR12Q9C0I1 747 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 NAT10Q9H0A0 1025 aaKnown RBP14.75□□□□□ -0.05
SHMT2-234ENST00000557703 AGAP1Q9UPQ3 857 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-234ENST00000557703 LRRIQ3A6PVS8 624 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-234ENST00000557703 P4HA2O15460 535 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 N4BP1O75113 896 aaKnown RBP14.74□□□□□ -0.05
SHMT2-234ENST00000557703 PHACTR2O75167 634 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 C4BPAP04003 597 aaKnown RBP14.74□□□□□ -0.05
SHMT2-234ENST00000557703 P4HA1P13674 534 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 HOXB8P17481 243 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-234ENST00000557703 IRS1P35568 1242 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 NDUFV1P49821 464 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 PMS1P54277 932 aaKnown RBP14.74□□□□□ -0.05
SHMT2-234ENST00000557703 CETN1Q12798 172 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 STX1AQ16623 288 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 CTC1Q2NKJ3 1217 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 SGSM1Q2NKQ1 1148 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 TCEAL5Q5H9L2 206 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 PLPP4Q5VZY2 271 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 KRT39Q6A163 491 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 METTL23Q86XA0 190 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 TOP6BLQ8N6T0 577 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 OR5B17Q8NGF7 314 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 LNX1Q8TBB1 728 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-234ENST00000557703 PABPC5Q96DU9 382 aaKnown RBP14.74□□□□□ -0.05
SHMT2-234ENST00000557703 SENP8Q96LD8 212 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 DUSP9Q99956 384 aaKnown RBP14.74□□□□□ -0.05
SHMT2-234ENST00000557703 IMPG2Q9BZV3 1241 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 PLEKHA4Q9H4M7 779 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 TMEM8AQ9HCN3 771 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 MTRRQ9UBK8 725 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 SIX4Q9UIU6 781 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 CTNND2Q9UQB3 1225 aa14.74□□□□□ -0.05
SHMT2-234ENST00000557703 COL4A4P53420 1690 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-234ENST00000557703 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-234ENST00000557703 TRIM49BA6NDI0 452 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 OR6C75A6NL08 312 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 HUS1O60921 280 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 KRT19P08727 400 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 KLRC2P26717 231 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 POLR2BP30876 1174 aaKnown RBP14.73□□□□□ -0.05
SHMT2-234ENST00000557703 WNT7BP56706 349 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 YWHAHQ04917 246 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-234ENST00000557703 ADAM15Q13444 863 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 TPD52L1Q16890 204 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-234ENST00000557703 AAK1Q2M2I8 961 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 SLC8B1Q6J4K2 584 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 ZNF280DQ6N043 979 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 CYP26C1Q6V0L0 522 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 C15orf39Q6ZRI6 1047 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 SV2AQ7L0J3 742 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 THEM5Q8N1Q8 247 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 CCDC150Q8NCX0 1101 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 ENOX1Q8TC92 643 aaKnown RBP14.73□□□□□ -0.05
SHMT2-234ENST00000557703 HASPINQ8TF76 798 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 RIN2Q8WYP3 895 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-234ENST00000557703 CASP10Q92851 521 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 HPDLQ96IR7 371 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 SRRTQ9BXP5 876 aaKnown RBP14.73□□□□□ -0.05
SHMT2-234ENST00000557703 RHOBTB2Q9BYZ6 727 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 GZF1Q9H116 711 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-234ENST00000557703 THAP9Q9H5L6 903 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 DZANK1Q9NVP4 752 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 TMEM63CQ9P1W3 806 aa14.73□□□□□ -0.05
SHMT2-234ENST00000557703 SCN1AP35498 2009 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 HIDE1A8MVS5 230 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 F8W810 466 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 CYB561D2O14569 222 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 TBC1D4O60343 1298 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 CNPP09543 421 aaKnown RBP14.72□□□□□ -0.05
SHMT2-234ENST00000557703 BRCC3P46736 316 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 NRIP1P48552 1158 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 LHX1P48742 406 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 HYAL1Q12794 435 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 BIRC3Q13489 604 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 NCOA4Q13772 614 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 KCNC3Q14003 757 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 RAB33AQ14088 237 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 PSMD5Q16401 504 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 UVSSAQ2YD98 709 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 PUS10Q3MIT2 529 aaKnown RBP14.72□□□□□ -0.05
SHMT2-234ENST00000557703 DPCR1Q3MIW9 517 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 CCDC40Q4G0X9 1142 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 RTP2Q5QGT7 225 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 VARS2Q5ST30 1063 aaKnown RBP14.72□□□□□ -0.05
SHMT2-234ENST00000557703 TPGS2Q68CL5 300 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 CAVIN1Q6NZI2 390 aaKnown RBP14.72□□□□□ -0.05
SHMT2-234ENST00000557703 TAS1R1Q7RTX1 841 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 LIMS2Q7Z4I7 341 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 CEP57Q86XR8 500 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 MICALL1Q8N3F8 863 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 TTC39CQ8N584 583 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 ZNF516Q92618 1163 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 RABGGTAQ92696 567 aa14.72□□□□□ -0.05
SHMT2-234ENST00000557703 HLA-CQ95604 372 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms