RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PTK2Q05397 1052 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 MTAPQ13126 283 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 NR1H3Q13133 447 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 FZD5Q13467 585 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 CAPSQ13938 189 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 PSMD5Q16401 504 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 LPAL2Q16609 132 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 PABPC1LQ4VXU2 614 aaKnown RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 XKR9Q5GH70 373 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 FAM171A1Q5VUB5 890 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 RSPO2Q6UXX9 243 aaPredicted RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 SKAP1Q86WV1 359 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 CEP57Q86XR8 500 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 C4orf19Q8IY42 314 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 RGL4Q8IZJ4 473 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 BLIDQ8IZY5 108 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 DEPDC4Q8N2C3 294 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 DAGLBQ8NCG7 672 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 LNX1Q8TBB1 728 aaPredicted RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 SLC7A14Q8TBB6 771 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 ASAP3Q8TDY4 903 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 ING5Q8WYH8 240 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 YTHDC1Q96MU7 727 aaKnown RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 TTPALQ9BTX7 342 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 AGXT2Q9BYV1 514 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 PLA2G2FQ9BZM2 168 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 SLKQ9H2G2 1235 aaPredicted RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 PIF1Q9H611 641 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 HEBP1Q9NRV9 189 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 DNMT3BQ9UBC3 853 aaKnown RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 PARP2Q9UGN5 583 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 GMEB2Q9UKD1 530 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 FRYQ5TBA9 3013 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 F5P12259 2224 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 ZMYM2Q9UBW7 1377 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 PTGESO14684 152 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 TBC1D4O60343 1298 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 MAN1A2O60476 641 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 DKC1O60832 514 aaKnown RBP eCLIP6.47□□□□□ -1.37
VPS33B-207ENST00000557470 ECI2O75521 394 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 POU2F2P09086 479 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 RPS6KB1P23443 525 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 PDIA3P30101 505 aaKnown RBP6.47□□□□□ -1.37
VPS33B-207ENST00000557470 CYP4A11Q02928 519 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 ADCY1Q08828 1119 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 SPIRE1Q08AE8 756 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 NCBP1Q09161 790 aaKnown RBP6.47□□□□□ -1.37
VPS33B-207ENST00000557470 SPEM2Q0P670 501 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 TUSC3Q13454 348 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 TFDP1Q14186 410 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 CTTNQ14247 550 aaKnown RBP6.47□□□□□ -1.37
VPS33B-207ENST00000557470 MXD4Q14582 209 aaPredicted RBP6.47□□□□□ -1.37
VPS33B-207ENST00000557470 EPHA7Q15375 998 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 SLC5A9Q2M3M2 681 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 BMP2KLQ5H9B9 411 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 PPM1JQ5JR12 505 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 INTS6LQ5JSJ4 861 aaKnown RBP6.47□□□□□ -1.37
VPS33B-207ENST00000557470 AXDND1Q5T1B0 1012 aaPredicted RBP6.47□□□□□ -1.37
VPS33B-207ENST00000557470 RNF187Q5TA31 235 aaPredicted RBP6.47□□□□□ -1.37
VPS33B-207ENST00000557470 NCAPH2Q6IBW4 605 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 SLC27A1Q6PCB7 646 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 BLOC1S2Q6QNY1 142 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 ZNF852Q6ZMS4 543 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 OTUD6AQ7L8S5 288 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 TRIM22Q8IYM9 498 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 HACE1Q8IYU2 909 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 FBXL16Q8N461 479 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 HAS1Q92839 578 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 DYDC2Q96IM9 177 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 FAM20AQ96MK3 541 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 AIFM3Q96NN9 605 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 FAM126AQ9BYI3 521 aaPredicted RBP6.47□□□□□ -1.37
VPS33B-207ENST00000557470 CXCL16Q9H2A7 254 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 DNMT3LQ9UJW3 386 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 KCNH3Q9ULD8 1083 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 SNX14Q9Y5W7 946 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.47□□□□□ -1.37
VPS33B-207ENST00000557470 NOTCH4Q99466 2003 aa6.47□□□□□ -1.37
VPS33B-207ENST00000557470 ARID2Q68CP9 1835 aa6.46□□□□□ -1.37
VPS33B-207ENST00000557470 A0A1B0GUA9 196 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.46□□□□□ -1.38
VPS33B-207ENST00000557470 SLC30A4O14863 429 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 NCAM2O15394 837 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 CCNT1O60563 726 aaKnown RBP6.46□□□□□ -1.38
VPS33B-207ENST00000557470 DEXIO95424 95 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 RHOP08100 348 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 CEBPBP17676 345 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 GLRA2P23416 452 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 FCARP24071 287 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 IGFBP6P24592 240 aaPredicted RBP6.46□□□□□ -1.38
VPS33B-207ENST00000557470 OR1D2P34982 312 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 ARL2P36404 184 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 EVCP57679 992 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 POU5F1BQ06416 359 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 SSRP1Q08945 709 aaKnown RBP6.46□□□□□ -1.38
VPS33B-207ENST00000557470 RAB33AQ14088 237 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 GRM2Q14416 872 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 TCEAL1Q15170 157 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 NAB2Q15742 525 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 LAIR1Q6GTX8 287 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms