RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 LILRA4P59901 499 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 ASIC1P78348 528 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 YWHAHQ04917 246 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-224ENST00000556737 POSTNQ15063 836 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 UVSSAQ2YD98 709 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 CTXN3Q4LDR2 81 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 UNC13DQ70J99 1090 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 RTL10Q7L3V2 364 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 UBALD2Q8IYN6 164 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 APPL2Q8NEU8 664 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 ZNF461Q8TAF7 563 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 CXorf38Q8TB03 319 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-224ENST00000556737 RSAD2Q8WXG1 361 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 FAM84AQ96KN4 292 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 LRRC27Q9C0I9 530 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 KCNK12Q9HB15 430 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 DUSP12Q9UNI6 340 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 ARIH1Q9Y4X5 557 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-224ENST00000556737 TIMM13Q9Y5L4 95 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-224ENST00000556737 MYO10Q9HD67 2058 aa11.19□□□□□ -0.62
SHMT2-224ENST00000556737 COL4A2P08572 1712 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 UBE4BO95155 1302 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 PTPRJQ12913 1337 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 GOLGA8IPA6NC78 632 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 GOLGA8JA6NMD2 632 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 ANHXE9PGG2 379 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 NRG2O14511 850 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-224ENST00000556737 XYLBO75191 536 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 IL18RAPO95256 599 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 OR4Q2P0C623 313 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 PFKFB1P16118 471 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 TYMPP19971 482 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 FSHRP23945 695 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 ARPP19P56211 112 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 CUL4BQ13620 913 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 HTR4Q13639 388 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 SLC5A9Q2M3M2 681 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 FAM26FQ5R3K3 315 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 TPGS2Q68CL5 300 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 SCARA3Q6AZY7 606 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 POTEHQ6S545 545 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 RNF19BQ6ZMZ0 732 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 TCEAL8Q8IYN2 117 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 GRAMD1CQ8IYS0 662 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 ITFG1Q8TB96 612 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 SENP8Q96LD8 212 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 BLZF1Q9H2G9 400 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 TMEM206Q9H813 350 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 FAM13BQ9NYF5 915 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 RBAKQ9NYW8 714 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-224ENST00000556737 DNMT3BQ9UBC3 853 aaKnown RBP11.18□□□□□ -0.62
SHMT2-224ENST00000556737 KCNH3Q9ULD8 1083 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 HPSEQ9Y251 543 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 INSL5Q9Y5Q6 135 aa11.18□□□□□ -0.62
SHMT2-224ENST00000556737 COL4A3Q01955 1670 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 FAM237AA0A1B0GTK4 181 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 GOLGA6L22H0YM25 854 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 TGFB1I1O43294 461 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 NARSO43776 548 aaKnown RBP11.17□□□□□ -0.62
SHMT2-224ENST00000556737 KLRC4O43908 158 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 EXTL3O43909 919 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 CYP11A1P05108 521 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 ODC1P11926 461 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 LAMP2P13473 410 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 CPB1P15086 417 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 VCPP55072 806 aaKnown RBP11.17□□□□□ -0.62
SHMT2-224ENST00000556737 AMPD3Q01432 767 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 TDGQ13569 410 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 PABPC1LQ4VXU2 614 aaKnown RBP11.17□□□□□ -0.62
SHMT2-224ENST00000556737 PRSS36Q5K4E3 855 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 OVOS1Q6IE37 1185 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 ARMCX5Q6P1M9 558 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 DSTYKQ6XUX3 929 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 NT5DC4Q86YG4 428 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 NPAS3Q8IXF0 933 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 SYCP3Q8IZU3 236 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 FBXL6Q8N531 539 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 C1orf127Q8N9H9 656 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 OR10T2Q8NGX3 314 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 ZNF507Q8TCN5 953 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 SCFD1Q8WVM8 642 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 FGF13Q92913 245 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 PBXIP1Q96AQ6 731 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 BORCS6Q96GS4 357 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 TMEM209Q96SK2 561 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 RTP3Q9BQQ7 232 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 CRISPLD1Q9H336 500 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 PCIF1Q9H4Z3 704 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 CYP4F11Q9HBI6 524 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 AVENQ9NQS1 362 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-224ENST00000556737 DPP3Q9NY33 737 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.17□□□□□ -0.62
SHMT2-224ENST00000556737 IGSF9Q9P2J2 1179 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 AFF4Q9UHB7 1163 aaKnown RBP11.17□□□□□ -0.62
SHMT2-224ENST00000556737 SERTAD1Q9UHV2 236 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 CDH7Q9ULB5 785 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 POLIQ9UNA4 740 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 YIPF1Q9Y548 306 aa11.17□□□□□ -0.62
SHMT2-224ENST00000556737 ZDBF2Q9HCK1 2354 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms