RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 C16orf71Q8IYS4 520 aaPredicted RBP5.9□□□□□ -1.46
SRP54-211ENST00000556445 CNTD1Q8N815 330 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 CHST14Q8NCH0 376 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 DNERQ8NFT8 737 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 PIGBQ92521 554 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 FOXRED1Q96CU9 486 aaPredicted RBP5.9□□□□□ -1.46
SRP54-211ENST00000556445 SUCLG2Q96I99 432 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 LOXL4Q96JB6 756 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 TTC14Q96N46 770 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 KRTAP4-2Q9BYR5 136 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 LRRC27Q9C0I9 530 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 OR10A5Q9H207 317 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 BICC1Q9H694 974 aaKnown RBP5.9□□□□□ -1.46
SRP54-211ENST00000556445 SEC61A2Q9H9S3 476 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 TCF7L1Q9HCS4 588 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 PHTF1Q9UMS5 762 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 DGKBQ9Y6T7 804 aa5.9□□□□□ -1.46
SRP54-211ENST00000556445 SPATA31A5Q5VU36 1347 aa5.9□□□□□ -1.47
SRP54-211ENST00000556445 SPATA31A6Q5VVP1 1343 aa5.9□□□□□ -1.47
SRP54-211ENST00000556445 SPATA31A7Q8IWB4 1347 aa5.9□□□□□ -1.47
SRP54-211ENST00000556445 NRAPQ86VF7 1730 aa5.9□□□□□ -1.47
SRP54-211ENST00000556445 AK9Q5TCS8 1911 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 SLIT2O94813 1529 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 TOGARAM1Q9Y4F4 1720 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 ERVV-1B6SEH8 477 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 GOLGA6L22H0YM25 854 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 BRINP1O60477 761 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 RHOBTB3O94955 611 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 HMGB2P26583 209 aaKnown RBP5.89□□□□□ -1.47
SRP54-211ENST00000556445 ADCY8P40145 1251 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 CD83Q01151 205 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 BIRC3Q13489 604 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 GALEQ14376 348 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 ICAM4Q14773 271 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 GRM3Q14832 879 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 JAKMIP3Q5VZ66 844 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 C1orf228Q6PIY5 440 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 RTN4RL1Q86UN2 441 aaPredicted RBP5.89□□□□□ -1.47
SRP54-211ENST00000556445 AHI1Q8N157 1196 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 NKAPQ8N5F7 415 aaKnown RBP5.89□□□□□ -1.47
SRP54-211ENST00000556445 HIPK4Q8NE63 616 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 RILPL2Q969X0 211 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 C8orf49Q96NF6 230 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 ALDH8A1Q9H2A2 487 aaPredicted RBP5.89□□□□□ -1.47
SRP54-211ENST00000556445 GPR108Q9NPR9 543 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 ECHDC1Q9NTX5 307 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 KLHL11Q9NVR0 708 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 SAGE1Q9NXZ1 904 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 SLC45A1Q9Y2W3 748 aa5.89□□□□□ -1.47
SRP54-211ENST00000556445 NUP188Q5SRE5 1749 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 ABHD14A-ACY1A0A1B0GW23 586 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 hCG_1984214I3L0E3 225 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 CBX4O00257 560 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 FIBPO43427 364 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 KRT37O76014 449 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 A1BGP04217 495 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 PCCAP05165 728 aaPredicted RBP5.88□□□□□ -1.47
SRP54-211ENST00000556445 POU3F2P20265 443 aaPredicted RBP5.88□□□□□ -1.47
SRP54-211ENST00000556445 CHMLP26374 656 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 IL6STP40189 918 aaPredicted RBP5.88□□□□□ -1.47
SRP54-211ENST00000556445 MCM2P49736 904 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 EIF4HQ15056 248 aaKnown RBP5.88□□□□□ -1.47
SRP54-211ENST00000556445 PIK3R6Q5UE93 754 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 CFAP161Q6P656 301 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 C16orf54Q6UWD8 224 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 LARP4Q71RC2 724 aaKnown RBP eCLIP5.88□□□□□ -1.47
SRP54-211ENST00000556445 UBE3BQ7Z3V4 1068 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 ANKRD23Q86SG2 305 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 CIR1Q86X95 450 aaPredicted RBP5.88□□□□□ -1.47
SRP54-211ENST00000556445 UNC5CLQ8IV45 518 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 OTUD7AQ8TE49 926 aaPredicted RBP5.88□□□□□ -1.47
SRP54-211ENST00000556445 ISCA1Q9BUE6 129 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 PLA2G12BQ9BX93 195 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 C1QTNF3Q9BXJ4 246 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 CD248Q9HCU0 757 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 IL1RAPL2Q9NP60 686 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 NLRC4Q9NPP4 1024 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 ST6GALNAC2Q9UJ37 374 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 FBXO10Q9UK96 956 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 PNMA8BQ9ULN7 279 aaPredicted RBP5.88□□□□□ -1.47
SRP54-211ENST00000556445 FAM50BQ9Y247 325 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 LUC7L2Q9Y383 392 aaKnown RBP5.88□□□□□ -1.47
SRP54-211ENST00000556445 MAP3K15Q6ZN16 1313 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 TUBGCP6Q96RT7 1819 aa5.88□□□□□ -1.47
SRP54-211ENST00000556445 PTPDC1A2A3K4 754 aa5.87□□□□□ -1.47
SRP54-211ENST00000556445 PMM2O15305 246 aa5.87□□□□□ -1.47
SRP54-211ENST00000556445 ORC4O43929 436 aa5.87□□□□□ -1.47
SRP54-211ENST00000556445 DHX16O60231 1041 aaKnown RBP5.87□□□□□ -1.47
SRP54-211ENST00000556445 MAFO75444 373 aaPredicted RBP5.87□□□□□ -1.47
SRP54-211ENST00000556445 CIAO1O76071 339 aa5.87□□□□□ -1.47
SRP54-211ENST00000556445 CYP19A1P11511 503 aaPredicted RBP5.87□□□□□ -1.47
SRP54-211ENST00000556445 ZNF20P17024 532 aa5.87□□□□□ -1.47
SRP54-211ENST00000556445 IL15P40933 162 aaPredicted RBP5.87□□□□□ -1.47
SRP54-211ENST00000556445 FNTBP49356 437 aa5.87□□□□□ -1.47
SRP54-211ENST00000556445 KCNQ1P51787 676 aa5.87□□□□□ -1.47
SRP54-211ENST00000556445 EIF5P55010 431 aaKnown RBP5.87□□□□□ -1.47
SRP54-211ENST00000556445 PCBP1Q15365 356 aaKnown RBP eCLIP5.87□□□□□ -1.47
SRP54-211ENST00000556445 GPR158Q5T848 1215 aa5.87□□□□□ -1.47
SRP54-211ENST00000556445 CREB3L3Q68CJ9 461 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms