RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ANXA13P27216 316 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 HNRNPH3P31942 346 aaKnown RBP9.87□□□□□ -0.83
ACTN1-218ENST00000556343 CYLC1P35663 651 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-218ENST00000556343 OR1G1P47890 313 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 GUCY2FP51841 1108 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 LILRA4P59901 499 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 WDR5P61964 334 aaKnown RBP9.87□□□□□ -0.83
ACTN1-218ENST00000556343 CDK17Q00537 523 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 PTK2Q05397 1052 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 KLHL30Q0D2K2 578 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 ELAVL2Q12926 359 aaKnown RBP9.87□□□□□ -0.83
ACTN1-218ENST00000556343 ARID5BQ14865 1188 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 CLLU1OSQ5K130 101 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 SPOUT1Q5T280 376 aaKnown RBP9.87□□□□□ -0.83
ACTN1-218ENST00000556343 ZNF365Q70YC5 407 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 OTOP2Q7RTS6 562 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 ARHGEF19Q8IW93 802 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 TMEM86AQ8N2M4 240 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 TXLNBQ8N3L3 684 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 TOP6BLQ8N6T0 577 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 TC2NQ8N9U0 490 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 GSTCDQ8NEC7 633 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 APPL2Q8NEU8 664 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 SPATA18Q8TC71 538 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 HERVK_113Q902F9 699 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 CCDC42Q96M95 316 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 CASD1Q96PB1 797 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 SLC9A7Q96T83 725 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 YME1L1Q96TA2 773 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 XYLT2Q9H1B5 865 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 SNX25Q9H3E2 840 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 LUC7LQ9NQ29 371 aaKnown RBP9.87□□□□□ -0.83
ACTN1-218ENST00000556343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.87□□□□□ -0.83
ACTN1-218ENST00000556343 TBC1D13Q9NVG8 400 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 GDAP2Q9NXN4 497 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 STK39Q9UEW8 545 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 KIAA1257Q9ULG3 409 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 ZMYND8Q9ULU4 1186 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-218ENST00000556343 PLAGL2Q9UPG8 496 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 SNX9Q9Y5X1 595 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 SLC4A7Q9Y6M7 1214 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 BRCA2P51587 3418 aa9.87□□□□□ -0.83
ACTN1-218ENST00000556343 F8VZ95 297 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 FOXN3O00409 490 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-218ENST00000556343 CYB561D2O14569 222 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 EPHB6O15197 1021 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 MED7O43513 233 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 TACC1O75410 805 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 DGKIO75912 1065 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 ODC1P11926 461 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 LHX1P48742 406 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 ALDH7A1P49419 539 aaKnown RBP9.86□□□□□ -0.83
ACTN1-218ENST00000556343 CLCNKBP51801 687 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 JAM2P57087 298 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 UPP1Q16831 310 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 TCTN1Q2MV58 587 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 TDRD12Q587J7 1177 aaKnown RBP9.86□□□□□ -0.83
ACTN1-218ENST00000556343 TMEM240Q5SV17 173 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 SPOPLQ6IQ16 392 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 DPY19L2P1Q6NXN4 242 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 GJB7Q6PEY0 223 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 COLGALT2Q8IYK4 626 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 FAM71AQ8IYT1 594 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 CMTR2Q8IYT2 770 aaKnown RBP9.86□□□□□ -0.83
ACTN1-218ENST00000556343 CCDC170Q8IYT3 715 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 THEM5Q8N1Q8 247 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 CXorf38Q8TB03 319 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 SHC3Q92529 594 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 BAP1Q92560 729 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 BCO2Q9BYV7 579 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 PDCL3Q9H2J4 239 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 APOBEC3GQ9HC16 384 aaKnown RBP9.86□□□□□ -0.83
ACTN1-218ENST00000556343 CISHQ9NSE2 258 aa9.86□□□□□ -0.83
ACTN1-218ENST00000556343 BARX2Q9UMQ3 279 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-218ENST00000556343 SSU72P8A0A1W2PR75 194 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 TMEM189-UBE2V1I3L0A0 370 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 ARHGAP6O43182 974 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 CCP110O43303 1012 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 AKR1B10O60218 316 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 LRRN2O75325 713 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 GFPT2O94808 682 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 WEE2P0C1S8 567 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 SKILP12757 684 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 LAG3P18627 525 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 CD58P19256 250 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 TNFAIP3P21580 790 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 GNL1P36915 607 aaPredicted RBP9.85□□□□□ -0.83
ACTN1-218ENST00000556343 PRKCIP41743 596 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 PDE6CP51160 858 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 APBA1Q02410 837 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 ARID5AQ03989 594 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 SOX4Q06945 474 aaPredicted RBP9.85□□□□□ -0.83
ACTN1-218ENST00000556343 DSC1Q08554 894 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 BTG3Q14201 252 aaPredicted RBP9.85□□□□□ -0.83
ACTN1-218ENST00000556343 SPA17Q15506 151 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 NAB2Q15742 525 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 MEA1Q16626 185 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 PPP1R2P3Q6NXS1 205 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 TMEM270Q6UE05 265 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 UNC93AQ86WB7 457 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms