RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 LRRC37A2A6NM11 1700 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 GBF1Q92538 1859 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 TRBV23OR9-2A0A075B6M9 112 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 FAM221BA6H8Z2 402 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 ZNF503-AS2A6NEH8 195 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 PRPF3O43395 683 aaKnown RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 EPB41L2O43491 1005 aaKnown RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 ZEB2O60315 1214 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 DUSP11O75319 330 aaKnown RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 EIF3JO75822 258 aaKnown RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 THBDP07204 575 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 PLS3P13797 630 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 L1CAMP32004 1257 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 GRIA2P42262 883 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 ADCY7P51828 1080 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 ANAPC15P60006 121 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 SP4Q02446 784 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 IFRD2Q12894 506 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 KIR3DS1Q14943 382 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 PGM5Q15124 567 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 PPP2R5BQ15173 497 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 LRRC41Q15345 812 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 BRDTQ58F21 947 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 FAM47CQ5HY64 1035 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 TAPT1Q6NXT6 567 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 CPNE8Q86YQ8 564 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 DHX37Q8IY37 1157 aaKnown RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 PCSK9Q8NBP7 692 aaKnown RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 NUP43Q8NFH3 380 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 ZNF669Q96BR6 464 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 SHISA4Q96DD7 197 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 MTMR8Q96EF0 704 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 ZNF274Q96GC6 653 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 PGBD1Q96JS3 809 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 IWS1Q96ST2 819 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 SPATA9Q9BWV2 254 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 OSBPL2Q9H1P3 480 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 MLXIPQ9HAP2 919 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 C6orf50Q9HD87 102 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 VTA1Q9NP79 307 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 PXMP2Q9NR77 195 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 TMEM260Q9NX78 707 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 SNTG2Q9NY99 539 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 FAM53CQ9NYF3 392 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 OGDHLQ9ULD0 1010 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 TPCN1Q9ULQ1 816 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 ZMYND8Q9ULU4 1186 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 PCDHA6Q9UN73 950 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 YBX2Q9Y2T7 364 aaKnown RBP5.29□□□□□ -1.56
ATXN3-237ENST00000556274 PCDHA8Q9Y5H6 950 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 TCHHQ07283 1943 aa5.29□□□□□ -1.56
ATXN3-237ENST00000556274 SYNRGQ9UMZ2 1314 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 CEP290O15078 2479 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 A0A1W2PQJ5 194 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 MYADML2A6NDP7 307 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 LRRC10BA6NIK2 292 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 H0YGN5 161 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 DNM1LO00429 736 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 MARCH6O60337 910 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 PQBP1O60828 265 aaKnown RBP5.28□□□□□ -1.56
ATXN3-237ENST00000556274 CDKL5O76039 1030 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 EFEMP2O95967 443 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 CPP00450 1065 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 GH1P01241 217 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 ASGR1P07306 291 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 SCG2P13521 617 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 PNLIPP16233 465 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 CAPN2P17655 700 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 XBP1P17861 261 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 ARL4AP40617 200 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 HSD17B4P51659 736 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 ACLYP53396 1101 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 PSMC6P62333 389 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 CYP4F8P98187 520 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 TRIM29Q14134 588 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 BMS1Q14692 1282 aaKnown RBP5.28□□□□□ -1.56
ATXN3-237ENST00000556274 MLANAQ16655 118 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 FSCN1Q16658 493 aaKnown RBP5.28□□□□□ -1.56
ATXN3-237ENST00000556274 PFKFB3Q16875 520 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-237ENST00000556274 UTP14CQ5TAP6 766 aaKnown RBP5.28□□□□□ -1.56
ATXN3-237ENST00000556274 WWC2Q6AWC2 1192 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 CXCL17Q6UXB2 119 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 SLC39A5Q6ZMH5 540 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 TRMT1LQ7Z2T5 733 aaKnown RBP5.28□□□□□ -1.56
ATXN3-237ENST00000556274 TLK2Q86UE8 772 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 CCDC83Q8IWF9 413 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 POU5F2Q8N7G0 328 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 TMEM145Q8NBT3 493 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 FRS2Q8WU20 508 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 SCFD2Q8WU76 684 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 CCDC12Q8WUD4 166 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-237ENST00000556274 GLT1D1Q96MS3 346 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 DNAJC7Q99615 494 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 LBHD1Q9BQE6 289 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-237ENST00000556274 ALG1Q9BT22 464 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 AARSD1Q9BTE6 412 aaKnown RBP5.28□□□□□ -1.56
ATXN3-237ENST00000556274 IER2Q9BTL4 223 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 SLC6A17Q9H1V8 727 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 ZSWIM4Q9H7M6 989 aa5.28□□□□□ -1.56
ATXN3-237ENST00000556274 CRTAC1Q9NQ79 661 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms