RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 RNF168Q8IYW5 571 aaPredicted RBP15.24■□□□□ 0.03
SNX6-206ENST00000556162 HPDLQ96IR7 371 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 TTPALQ9BTX7 342 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 HERC2P3Q9BVR0 1158 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 ZBP1Q9H171 429 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 CHST7Q9NS84 486 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 FANCLQ9NW38 375 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 MTMR10Q9NXD2 777 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 SSX2IPQ9Y2D8 614 aa15.24■□□□□ 0.03
SNX6-206ENST00000556162 ARHGEF37A1IGU5 675 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 SPTLC1O15269 473 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 URODP06132 367 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 ATICP31939 592 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 CA8P35219 290 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 GLUD2P49448 558 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 AARSP49588 968 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNX6-206ENST00000556162 MXI1P50539 228 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 ADGRE1Q14246 886 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 SMC1AQ14683 1233 aaKnown RBP15.23■□□□□ 0.03
SNX6-206ENST00000556162 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.23■□□□□ 0.03
SNX6-206ENST00000556162 C15orf39Q6ZRI6 1047 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 AOPEPQ8N6M6 819 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 SENP8Q96LD8 212 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 MRPL17Q9NRX2 175 aaKnown RBP15.23■□□□□ 0.03
SNX6-206ENST00000556162 BECN2A8MW95 431 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 M0QZQ0 153 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 SYN3O14994 580 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 CLSTN1O94985 981 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 POU3F3P20264 500 aaPredicted RBP15.23■□□□□ 0.03
SNX6-206ENST00000556162 FGFR3P22607 806 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 IRS1P35568 1242 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 MYL6P60660 151 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 DSG1Q02413 1049 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 SGSM1Q2NKQ1 1148 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 PLPP4Q5VZY2 271 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 APPL2Q8NEU8 664 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 MYLIPQ8WY64 445 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 B3GALT6Q96L58 329 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 GUCD1Q96NT3 240 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 PCDHB8Q9UN66 801 aa15.23■□□□□ 0.03
SNX6-206ENST00000556162 KCNJ18B7U540 433 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 C2CD2LO14523 706 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 CYB561D2O14569 222 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 FSCN2O14926 492 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 N4BP1O75113 896 aaKnown RBP15.22■□□□□ 0.03
SNX6-206ENST00000556162 VNN1O95497 513 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 HLA-DRAP01903 254 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 AFPP02771 609 aaKnown RBP15.22■□□□□ 0.03
SNX6-206ENST00000556162 ODC1P11926 461 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 KCNA4P22459 653 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 EEF1GP26641 437 aaKnown RBP15.22■□□□□ 0.03
SNX6-206ENST00000556162 TKTP29401 623 aaKnown RBP15.22■□□□□ 0.03
SNX6-206ENST00000556162 PIK3CAP42336 1068 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 CETN1Q12798 172 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 KCNH2Q12809 1159 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 KCNJ12Q14500 433 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 NCAPHQ15003 741 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 TCP11X2Q5H9J9 407 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 RTP2Q5QGT7 225 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 KIAA0319Q5VV43 1072 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 PDXDC1Q6P996 788 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 LRSAM1Q6UWE0 723 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 GPR65Q8IYL9 337 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 MRPL43Q8N983 215 aaKnown RBP15.22■□□□□ 0.03
SNX6-206ENST00000556162 CCDC150Q8NCX0 1101 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 FBXL13Q8NEE6 735 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 TAS1R2Q8TE23 839 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 AUTS2Q8WXX7 1259 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 RIN2Q8WYP3 895 aaPredicted RBP15.22■□□□□ 0.03
SNX6-206ENST00000556162 SNX9Q9Y5X1 595 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 MTCH2Q9Y6C9 303 aa15.22■□□□□ 0.03
SNX6-206ENST00000556162 PLXNA4Q9HCM2 1894 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 HUS1O60921 280 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 STAU1O95793 577 aaKnown RBP15.21■□□□□ 0.03
SNX6-206ENST00000556162 CDK11BP21127 795 aaKnown RBP15.21■□□□□ 0.03
SNX6-206ENST00000556162 FMO5P49326 533 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 PTPN14Q15678 1187 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 ZNF699Q32M78 642 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 WDR72Q3MJ13 1102 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 CBWD6Q4V339 395 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 CBWD3Q5JTY5 395 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 CBWD5Q5RIA9 395 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 CDKAL1Q5VV42 579 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 DHX40Q8IX18 779 aaKnown RBP15.21■□□□□ 0.03
SNX6-206ENST00000556162 TAF4BQ92750 862 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 PPP2R3CQ969Q6 453 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 IMPG2Q9BZV3 1241 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 RAB20Q9NX57 234 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 GDAP2Q9NXN4 497 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 IRAK3Q9Y616 596 aa15.21■□□□□ 0.03
SNX6-206ENST00000556162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.2■□□□□ 0.02
SNX6-206ENST00000556162 PRKCSHP14314 528 aaPredicted RBP15.2■□□□□ 0.02
SNX6-206ENST00000556162 FOSL2P15408 326 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 TYMPP19971 482 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 MAN2A1Q16706 1144 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 ANKS3Q6ZW76 656 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 ANKRD20A12PQ8NF67 263 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 PIK3R5Q8WYR1 880 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 TUBGCP2Q9BSJ2 902 aa15.2■□□□□ 0.02
SNX6-206ENST00000556162 XYLT2Q9H1B5 865 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms