RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 STX10O60499 249 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 DGAT1O75907 488 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 ALDH2P05091 517 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 SRFP11831 508 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 MTIF2P46199 727 aaKnown RBP12.03□□□□□ -0.48
CHGA-205ENST00000556098 GLUD2P49448 558 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 RAB27AP51159 221 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 AFF1P51825 1210 aaKnown RBP12.03□□□□□ -0.48
CHGA-205ENST00000556098 XKR3Q5GH77 459 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.03□□□□□ -0.48
CHGA-205ENST00000556098 C15orf39Q6ZRI6 1047 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 HS2ST1Q7LGA3 356 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 TAS1R1Q7RTX1 841 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 IRF2BP1Q8IU81 584 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 PIGOQ8TEQ8 1089 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 CACTINQ8WUQ7 758 aaKnown RBP12.03□□□□□ -0.48
CHGA-205ENST00000556098 B3GALT6Q96L58 329 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 ERGIC2Q96RQ1 377 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 EDEM3Q9BZQ6 932 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 RSAD1Q9HA92 442 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 DAAM1Q9Y4D1 1078 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 VWA8A3KMH1 1905 aa12.03□□□□□ -0.48
CHGA-205ENST00000556098 CARNS1A5YM72 827 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 GOLGA6L9A6NEM1 432 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 AKR1B15C9JRZ8 316 aaPredicted RBP12.02□□□□□ -0.49
CHGA-205ENST00000556098 TEX28O15482 410 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 GCNT3O95395 438 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 SRGAP2CP0DJJ0 459 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 SKILP12757 684 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 PLS3P13797 630 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 SMTNP53814 917 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 PMS1P54277 932 aaKnown RBP12.02□□□□□ -0.49
CHGA-205ENST00000556098 UBXN1Q04323 297 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 UBXN2BQ14CS0 331 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 C1orf210Q8IVY1 113 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 ZNF710Q8N1W2 664 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 MYCT1Q8N699 235 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 RABGGTAQ92696 567 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 HERC2P3Q9BVR0 1158 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 ZHX3Q9H4I2 956 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 WDR6Q9NNW5 1121 aaKnown RBP12.02□□□□□ -0.49
CHGA-205ENST00000556098 POLIQ9UNA4 740 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 EXOC7Q9UPT5 735 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 NUMBLQ9Y6R0 609 aa12.02□□□□□ -0.49
CHGA-205ENST00000556098 KIF26AQ9ULI4 1882 aaPredicted RBP12.02□□□□□ -0.49
CHGA-205ENST00000556098 A0A1W2PQJ5 194 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 F8W810 466 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 MAPK13O15264 365 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 LAMTOR5O43504 91 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 PPP1R37O75864 691 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 SOD2P04179 222 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 ITGA4P13612 1032 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 RPL17P18621 184 aaKnown RBP12.01□□□□□ -0.49
CHGA-205ENST00000556098 FECHP22830 423 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 RFC5P40937 340 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 CCZ1BP86790 482 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 CCZ1P86791 482 aaPredicted RBP12.01□□□□□ -0.49
CHGA-205ENST00000556098 ENPEPQ07075 957 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 XKR9Q5GH70 373 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 ARMCX5Q6P1M9 558 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 AGMOQ6ZNB7 445 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 ZNF720Q7Z2F6 126 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 SLC9A9Q8IVB4 645 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 C12orf56Q8IXR9 622 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 PJA1Q8NG27 643 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 SPIRE2Q8WWL2 714 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 RPS6KC1Q96S38 1066 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 JPH2Q9BR39 696 aaPredicted RBP12.01□□□□□ -0.49
CHGA-205ENST00000556098 NUCKS1Q9H1E3 243 aaKnown RBP12.01□□□□□ -0.49
CHGA-205ENST00000556098 TAB2Q9NYJ8 693 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 WRAP73Q9P2S5 460 aaPredicted RBP12.01□□□□□ -0.49
CHGA-205ENST00000556098 DPP7Q9UHL4 492 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 USP18Q9UMW8 372 aa12.01□□□□□ -0.49
CHGA-205ENST00000556098 MFAP3LO75121 409 aa12□□□□□ -0.49
CHGA-205ENST00000556098 HIP1RO75146 1068 aa12□□□□□ -0.49
CHGA-205ENST00000556098 ERLIN2O94905 339 aa12□□□□□ -0.49
CHGA-205ENST00000556098 EPB41P11171 864 aaKnown RBP12□□□□□ -0.49
CHGA-205ENST00000556098 NR2F2P24468 414 aa12□□□□□ -0.49
CHGA-205ENST00000556098 MLH1P40692 756 aa12□□□□□ -0.49
CHGA-205ENST00000556098 CSTF1Q05048 431 aaKnown RBP12□□□□□ -0.49
CHGA-205ENST00000556098 MAPK7Q13164 816 aa12□□□□□ -0.49
CHGA-205ENST00000556098 DMP1Q13316 513 aaPredicted RBP12□□□□□ -0.49
CHGA-205ENST00000556098 ARID5BQ14865 1188 aa12□□□□□ -0.49
CHGA-205ENST00000556098 NOLC1Q14978 699 aaKnown RBP eCLIP12□□□□□ -0.49
CHGA-205ENST00000556098 PPP2R5AQ15172 486 aa12□□□□□ -0.49
CHGA-205ENST00000556098 TSR1Q2NL82 804 aaKnown RBP12□□□□□ -0.49
CHGA-205ENST00000556098 CCDC40Q4G0X9 1142 aa12□□□□□ -0.49
CHGA-205ENST00000556098 VWA3BQ502W6 1294 aa12□□□□□ -0.49
CHGA-205ENST00000556098 ZNF410Q86VK4 478 aa12□□□□□ -0.49
CHGA-205ENST00000556098 FMNL3Q8IVF7 1028 aa12□□□□□ -0.49
CHGA-205ENST00000556098 ZNF397Q8NF99 534 aaPredicted RBP12□□□□□ -0.49
CHGA-205ENST00000556098 TMEM143Q96AN5 459 aa12□□□□□ -0.49
CHGA-205ENST00000556098 TMEM175Q9BSA9 504 aa12□□□□□ -0.49
CHGA-205ENST00000556098 STRA6Q9BX79 667 aa12□□□□□ -0.49
CHGA-205ENST00000556098 NIFKQ9BYG3 293 aaKnown RBP12□□□□□ -0.49
CHGA-205ENST00000556098 BCO2Q9BYV7 579 aa12□□□□□ -0.49
CHGA-205ENST00000556098 VPS16Q9H269 839 aa12□□□□□ -0.49
CHGA-205ENST00000556098 AGPAT5Q9NUQ2 364 aa12□□□□□ -0.49
CHGA-205ENST00000556098 MARCH5Q9NX47 278 aa12□□□□□ -0.49
CHGA-205ENST00000556098 EPS15L1Q9UBC2 864 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms