RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PSMC1P62191 440 aaKnown RBP6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 LCNL1Q6ZST4 164 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 EXOC8Q8IYI6 725 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 OR2C3Q8N628 320 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 PCSK9Q8NBP7 692 aaKnown RBP6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 ATXN2LQ8WWM7 1075 aaKnown RBP6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 SGCZQ96LD1 299 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 RIPOR3Q96MK2 946 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 TEPSINQ96N21 525 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 SELENOOQ9BVL4 669 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 CHMP4AQ9BY43 222 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 PARD6AQ9NPB6 346 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 PLCB1Q9NQ66 1216 aa6.63□□□□□ -1.35
CKS1BP1-201ENST00000555221 DRGXA6NNA5 263 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 GPR42O15529 346 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 AGFG2O95081 481 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 ABHD16AO95870 558 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 ITGB1P05556 798 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 HK1P19367 917 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 POU6F2P78424 691 aaPredicted RBP6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 SLC13A2Q13183 592 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 RAB32Q13637 225 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 DAG1Q14118 895 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 LMBRD2Q68DH5 695 aaPredicted RBP6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 XRRA1Q6P2D8 792 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 MED25Q71SY5 747 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 SESTD1Q86VW0 696 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 SGMS1Q86VZ5 419 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 ENAHQ8N8S7 591 aaPredicted RBP6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 TBC1D15Q8TC07 691 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 NUP133Q8WUM0 1156 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 FAM89AQ96GI7 184 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 ZNF518BQ9C0D4 1074 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 SACM1LQ9NTJ5 587 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 STK32BQ9NY57 414 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 SLC45A2Q9UMX9 530 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 PLEKHM1Q9Y4G2 1056 aa6.62□□□□□ -1.35
CKS1BP1-201ENST00000555221 TRIM43BA6NCK2 446 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 POM121BA6NF01 834 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 CAPN14A8MX76 684 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 GOLGA6L6A8MZA4 724 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 PARP1P09874 1014 aaKnown RBP6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 COMTP21964 271 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 TNFSF4P23510 183 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 SLC6A2P23975 617 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 STT3AP46977 705 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 ZNF135P52742 658 aaPredicted RBP6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 CSRP2Q16527 193 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 HS1BP3Q53T59 392 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 C10orf62Q5T681 223 aaPredicted RBP6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 C1orf228Q6PIY5 440 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 TRIM43Q96BQ3 446 aaPredicted RBP6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 ARPC5LQ9BPX5 153 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 COLEC11Q9BWP8 271 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 BRIP1Q9BX63 1249 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 TINAGL1Q9GZM7 467 aaPredicted RBP6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 ADAM7Q9H2U9 754 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 ARFGAP3Q9NP61 516 aa6.61□□□□□ -1.35
CKS1BP1-201ENST00000555221 ABHD14A-ACY1A0A1B0GW23 586 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 PATE3B3GLJ2 98 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 MYO1CO00159 1063 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 IFRD1O00458 451 aaPredicted RBP6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 UNC5CO95185 931 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 CKBP12277 381 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 CHN2P52757 468 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 AMOTQ4VCS5 1084 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 DGKKQ5KSL6 1271 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 IZUMO3Q5VZ72 239 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 NAIF1Q69YI7 327 aaPredicted RBP6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 SPOCD1Q6ZMY3 1216 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 LIMS2Q7Z4I7 341 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 USP37Q86T82 979 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 CCDC33Q8N5R6 958 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 SLC17A8Q8NDX2 589 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 TMIEQ8NEW7 156 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 BRI3BPQ8WY22 251 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 PHACTR3Q96KR7 559 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 KLHL32Q96NJ5 620 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 CNPPD1Q9BV87 410 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 IMPG2Q9BZV3 1241 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 SMURF2Q9HAU4 748 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 SERHLQ9NQF3 203 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 COL20A1Q9P218 1284 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 FNIP2Q9P278 1114 aa6.6□□□□□ -1.35
CKS1BP1-201ENST00000555221 LOC102724159A0A0B4J2E5 919 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 PRICKLE3O43900 615 aaPredicted RBP6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 DNAJB5O75953 348 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 GRPP07492 148 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 TSHRP16473 764 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 GCSHP23434 173 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 RABGGTBP53611 331 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 PIGFQ07326 219 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 PWP2Q15269 919 aaKnown RBP6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 C3orf38Q5JPI3 329 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 FAM209BQ5JX69 171 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 HTR3DQ70Z44 454 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 ZFPM1Q8IX07 1006 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 SSBP3Q9BWW4 388 aaPredicted RBP6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 GPR87Q9BY21 358 aa6.59□□□□□ -1.35
CKS1BP1-201ENST00000555221 CERS4Q9HA82 394 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms