RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CFIP05156 583 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 MYL3P08590 195 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 HK3P52790 923 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 HMGA2P52926 109 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 INHBCP55103 352 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 TGFB2P61812 414 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 BIRC2Q13490 618 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 ATP2B3Q16720 1220 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 FLYWCH1Q4VC44 716 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 THEMIS2Q5TEJ8 643 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 TSHZ3Q63HK5 1081 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 ARHGEF19Q8IW93 802 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 C3orf20Q8ND61 904 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 FAM156AQ8NDB6 213 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 IL17RDQ8NFM7 739 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 C1GALT1C1Q96EU7 318 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 RPS6KC1Q96S38 1066 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 ADAM2Q99965 735 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 SARGQ9BW04 601 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 REXO4Q9GZR2 422 aaKnown RBP3.94□□□□□ -1.78
SCFD1-213ENST00000554776 C1orf112Q9NSG2 853 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 POLHQ9Y253 713 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 PCDHGB6Q9Y5F9 930 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 FPGT-TNNI3KV9GXZ4 949 aa3.94□□□□□ -1.78
SCFD1-213ENST00000554776 CCDC78A2IDD5 438 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 CDHR4A6H8M9 788 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 H3BML4 177 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 TPD52L2O43399 206 aaKnown RBP3.93□□□□□ -1.78
SCFD1-213ENST00000554776 SLC43A1O75387 559 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 UBXN7O94888 489 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 ARIH2O95376 493 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 HLA-DOAP06340 250 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 ELANEP08246 267 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 NBPF7P0C2Y1 421 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-213ENST00000554776 MTHFD1P11586 935 aaKnown RBP3.93□□□□□ -1.78
SCFD1-213ENST00000554776 CKBP12277 381 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 TRIM27P14373 513 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 IL12RB1P42701 662 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 OCA2Q04671 838 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 SLFN5Q08AF3 891 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 PTPAQ15257 358 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 CYB5RLQ6IPT4 315 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 ARMC6Q6NXE6 501 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 PCSK4Q6UW60 755 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 CCDC149Q6ZUS6 474 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 ZNF365Q70YC5 407 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 HEATR3Q7Z4Q2 680 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 MRGPRGQ86SM5 289 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 FAM90A1Q86YD7 464 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 MAPKAPK5Q8IW41 473 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 CPEB3Q8NE35 698 aaKnown RBP3.93□□□□□ -1.78
SCFD1-213ENST00000554776 NLGN4YQ8NFZ3 816 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-213ENST00000554776 PJA1Q8NG27 643 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 PARD3BQ8TEW8 1205 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 CHFRQ96EP1 664 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 SLC39A13Q96H72 371 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 CGRRF1Q99675 332 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 LRFN3Q9BTN0 628 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 APOL5Q9BWW9 433 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 RNPEPQ9H4A4 650 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 GSTO2Q9H4Y5 243 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 KMT5AQ9NQR1 393 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 MAN1C1Q9NR34 630 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 JKAMPQ9P055 326 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 USP25Q9UHP3 1055 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 PCDHA3Q9Y5H8 950 aa3.93□□□□□ -1.78
SCFD1-213ENST00000554776 COL4A3Q01955 1670 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 A0A1B0GTW7 788 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 GRID2IPA4D2P6 1211 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 TMEM191CA6NGB0 347 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 TPP1O14773 563 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 FOXN1O15353 648 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 FTH1P19P0C7X4 201 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 TYRP14679 529 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 RHCEP18577 417 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 FGFR4P22455 802 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 DDX6P26196 483 aaKnown RBP eCLIP3.92□□□□□ -1.78
SCFD1-213ENST00000554776 HTR1BP28222 390 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 PRDX5P30044 214 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 ZEB1P37275 1124 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-213ENST00000554776 NOMO3P69849 1222 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 NKX6-1P78426 367 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-213ENST00000554776 PURAQ00577 322 aaKnown RBP3.92□□□□□ -1.78
SCFD1-213ENST00000554776 RHDQ02161 417 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 HLTFQ14527 1009 aaKnown RBP eCLIP3.92□□□□□ -1.78
SCFD1-213ENST00000554776 CCDC157Q569K6 752 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 NOMO2Q5JPE7 1267 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 B3GNTL1Q67FW5 361 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-213ENST00000554776 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 NPNTQ6UXI9 565 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 SKAP1Q86WV1 359 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 CERS3Q8IU89 383 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 DENND1CQ8IV53 801 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 VRK3Q8IV63 474 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 TMEM132CQ8N3T6 1108 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 SH2D3CQ8N5H7 860 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 FITM2Q8N6M3 262 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 PLBD2Q8NHP8 589 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 NUP133Q8WUM0 1156 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 FAM167AQ96KS9 214 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms