RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 CCNE1P24864 410 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 RPL13P26373 211 aaKnown RBP11.56□□□□□ -0.56
CNIH1-204ENST00000554683 POLR2BP30876 1174 aaKnown RBP11.56□□□□□ -0.56
CNIH1-204ENST00000554683 NRIP1P48552 1158 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 PAK1Q13153 545 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 KCNC3Q14003 757 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 BMS1Q14692 1282 aaKnown RBP11.56□□□□□ -0.56
CNIH1-204ENST00000554683 CTC1Q2NKJ3 1217 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 DPCR1Q3MIW9 517 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 ANKRD40Q6AI12 368 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 SCARA3Q6AZY7 606 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 KLHL10Q6JEL2 608 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 EFHBQ8N7U6 833 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 PARD3BQ8TEW8 1205 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 NELFBQ8WX92 580 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 PPM1EQ8WY54 764 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 RIN2Q8WYP3 895 aaPredicted RBP11.56□□□□□ -0.56
CNIH1-204ENST00000554683 CCDC127Q96BQ5 260 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 PABPC5Q96DU9 382 aaKnown RBP11.56□□□□□ -0.56
CNIH1-204ENST00000554683 ANKRD36BP1Q96IX9 119 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 ZNF560Q96MR9 790 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 FNBP1Q96RU3 617 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 TSG101Q99816 390 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 MKNK1Q9BUB5 465 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 RXFP1Q9HBX9 757 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 FRMD4BQ9Y2L6 1034 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 NUB1Q9Y5A7 615 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 MUC3AQ02505 3323 aa11.56□□□□□ -0.56
CNIH1-204ENST00000554683 PTPRDP23468 1912 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 SLC16A3O15427 465 aaKnown RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 TEX28O15482 410 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 LINC01565O15544 149 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 TRAPPC3O43617 180 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 CLASP2O75122 1294 aaKnown RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 CXCL14O95715 111 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 TNNC2P02585 160 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 CNPP09543 421 aaKnown RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 CA8P35219 290 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 TAF6P49848 677 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 LILRA4P59901 499 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 DLG4P78352 724 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 RBM10P98175 930 aaKnown RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 CREMQ03060 361 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 ENPEPQ07075 957 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 BFSP1Q12934 665 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 ADAM9Q13443 819 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 PSMD5Q16401 504 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 C1orf220Q5T0J3 134 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 CCDC183Q5T5S1 534 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 KIAA1841Q6NSI8 718 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 PRSS55Q6UWB4 352 aaPredicted RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 INTS8Q75QN2 995 aaKnown RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 RBM23Q86U06 439 aaKnown RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 FAM186BQ8IYM0 893 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 LRRC52Q8N7C0 313 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 LNX1Q8TBB1 728 aaPredicted RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 CACTINQ8WUQ7 758 aaKnown RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 ZNF516Q92618 1163 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 EEF2KMTQ96G04 330 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 BORCS6Q96GS4 357 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 KLHL5Q96PQ7 755 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 POP1Q99575 1024 aaKnown RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 DUSP9Q99956 384 aaKnown RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 EMILIN2Q9BXX0 1053 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 TLE6Q9H808 572 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 UBE2ZQ9H832 354 aaPredicted RBP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 PRDM6Q9NQX0 595 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.55□□□□□ -0.56
CNIH1-204ENST00000554683 MTRRQ9UBK8 725 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 SSX2IPQ9Y2D8 614 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 HCFC2Q9Y5Z7 792 aa11.55□□□□□ -0.56
CNIH1-204ENST00000554683 BICDL2A1A5D9 508 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 CETN3O15182 167 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 NCK2O43639 380 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 TRIM49P0CI25 452 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 TRIM49CP0CI26 452 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 EPB41P11171 864 aaKnown RBP11.54□□□□□ -0.56
CNIH1-204ENST00000554683 TNNI1P19237 187 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 PAX3P23760 479 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 PSMC2P35998 433 aaKnown RBP11.54□□□□□ -0.56
CNIH1-204ENST00000554683 LTBRP36941 435 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 PNPLA4P41247 253 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 CLCN4P51793 760 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 MCCD1P59942 119 aaPredicted RBP11.54□□□□□ -0.56
CNIH1-204ENST00000554683 FKBP3Q00688 224 aaKnown RBP11.54□□□□□ -0.56
CNIH1-204ENST00000554683 SKIV2LQ15477 1246 aaKnown RBP11.54□□□□□ -0.56
CNIH1-204ENST00000554683 DUOXA2Q1HG44 320 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 SV2CQ496J9 727 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 VARS2Q5ST30 1063 aaKnown RBP11.54□□□□□ -0.56
CNIH1-204ENST00000554683 TDRD10Q5VZ19 366 aaKnown RBP11.54□□□□□ -0.56
CNIH1-204ENST00000554683 PDXDC1Q6P996 788 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 ANKS3Q6ZW76 656 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 TRAPPC11Q7Z392 1133 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 CEP57Q86XR8 500 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 MLKLQ8NB16 471 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 MED15Q96RN5 788 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 TMEM63CQ9P1W3 806 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 FNIP2Q9P278 1114 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 THEGQ9P2T0 379 aa11.54□□□□□ -0.56
CNIH1-204ENST00000554683 A0A0C4DFX4 3053 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms