RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 HSD17B4P51659 736 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 MDH1BQ5I0G3 518 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 TJAP1Q5JTD0 557 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 SEPT12Q8IYM1 358 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 RNF149Q8NC42 400 aa14.64□□□□□ -0.07
VTI1B-204ENST00000554659 PABPC3Q9H361 631 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 SARS2Q9NP81 518 aaKnown RBP14.64□□□□□ -0.07
VTI1B-204ENST00000554659 GFAPP14136 432 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 LVRNQ6Q4G3 990 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 ATXN7L3BQ96GX2 97 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 CLMNQ96JQ2 1002 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 PKD2L2Q9NZM6 624 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 L1RE1Q9UN81 338 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 NDUFB10O96000 172 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 TPI1P60174 286 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 PDCD6IPQ8WUM4 868 aaKnown RBP14.63□□□□□ -0.07
VTI1B-204ENST00000554659 MRPL1Q9BYD6 325 aaKnown RBP14.63□□□□□ -0.07
VTI1B-204ENST00000554659 ATP11BQ9Y2G3 1177 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 E9PCH4 1651 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 STAT5BP51692 787 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 ITIH4Q14624 930 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 TTC39BQ5VTQ0 682 aaPredicted RBP14.63□□□□□ -0.07
VTI1B-204ENST00000554659 TMEM154Q6P9G4 183 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 C3orf62Q6ZUJ4 267 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 EGFL8Q99944 293 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 RSAD1Q9HA92 442 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 WBP4O75554 376 aaKnown RBP14.63□□□□□ -0.07
VTI1B-204ENST00000554659 WEE2P0C1S8 567 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 LCP1P13796 627 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 PTK2BQ14289 1009 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 C4orf22Q6V702 233 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 KIF2BQ8N4N8 673 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 ASAP3Q8TDY4 903 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 UNC45AQ9H3U1 944 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 CCDC134Q9H6E4 229 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 PLEKHA5Q9HAU0 1116 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 PCMTD2Q9NV79 361 aa14.63□□□□□ -0.07
VTI1B-204ENST00000554659 C3orf70A6NLC5 250 aaPredicted RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 CSPG5O95196 566 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 ACOT2P49753 483 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 MAPK7Q13164 816 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 MXD4Q14582 209 aaPredicted RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 ZC2HC1CQ53FD0 456 aaPredicted RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 BTNL9Q6UXG8 535 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 PATL1Q86TB9 770 aaKnown RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 RIT2Q99578 217 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 FRMD8Q9BZ67 464 aaPredicted RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 MANSC1Q9H8J5 431 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 GTF3C4Q9UKN8 822 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 CHMP2BQ9UQN3 213 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 KCNA2P16389 499 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 RECQLP46063 649 aaPredicted RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 MAP3K10Q02779 954 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 RBBP7Q16576 425 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 SLC13A5Q86YT5 568 aaPredicted RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 TEX2Q8IWB9 1127 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 MYCBPAPQ8TBZ2 947 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 NSL1Q96IY1 281 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 THTPAQ9BU02 230 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 ADAM33Q9BZ11 813 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 B2RBV5 119 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 SULT1E1P49888 294 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 RBP5P82980 135 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 MRPL28Q13084 256 aaKnown RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 PRUNE1Q86TP1 453 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 TSPAN17Q96FV3 270 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 ZSWIM1Q9BR11 485 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 RPAP3Q9H6T3 665 aaPredicted RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 NOD2Q9HC29 1040 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 NAGPAQ9UK23 515 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 KDM6AO15550 1401 aaPredicted RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 A0A0G2JLW4 131 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 UBA6A0AVT1 1052 aaPredicted RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 APOBEC3FQ8IUX4 373 aaKnown RBP14.62□□□□□ -0.07
VTI1B-204ENST00000554659 PPIL6Q8IXY8 311 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 NSMCE4AQ9NXX6 385 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 TFR2Q9UP52 801 aa14.62□□□□□ -0.07
VTI1B-204ENST00000554659 WDR47O94967 919 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 VCAM1P19320 739 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 GEMIN4P57678 1058 aaKnown RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 CYB5D1Q6P9G0 228 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 SETD3Q86TU7 594 aaPredicted RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 JMJD4Q9H9V9 463 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 MARCOQ9UEW3 520 aaPredicted RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 LMTK2Q8IWU2 1503 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 DFFAO00273 331 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 MYO1DO94832 1006 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 NLRP11P59045 1033 aaKnown RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 ZNF772Q68DY9 489 aaPredicted RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 ADCK1Q86TW2 530 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 GRID1Q9ULK0 1009 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 HLA-DRAP01903 254 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 PLEKP08567 350 aaPredicted RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 SPRP35270 261 aaPredicted RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 KCNJ1P48048 391 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 BTBD8Q5XKL5 378 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 LRRC8BQ6P9F7 803 aa14.61□□□□□ -0.07
VTI1B-204ENST00000554659 CDR2LQ86X02 465 aaPredicted RBP14.61□□□□□ -0.07
VTI1B-204ENST00000554659 TBC1D16Q8TBP0 767 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms