RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 NFIBO00712 420 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CTSWP56202 376 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 TTLL6Q8N841 843 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 NKD1Q969G9 470 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 OSBP2Q969R2 916 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ZNF512Q96ME7 567 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 EIF2B3Q9NR50 452 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SNX5Q9Y5X3 404 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MAP3K21Q5TCX8 1036 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CNSTQ6PJW8 725 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PROSER1Q86XN7 944 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 SLC13A5Q86YT5 568 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CCDC60Q8IWA6 550 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 IPMKQ8NFU5 416 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 B3GALT6Q96L58 329 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PADI4Q9UM07 663 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 AGAP1Q9UPQ3 857 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 TNKSO95271 1327 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 FAM86B2P0C5J1 330 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GDI2P50395 445 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ACTN3Q08043 901 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CFAP221Q4G0U5 840 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 EPHA10Q5JZY3 1008 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GJB7Q6PEY0 223 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 RNF207Q6ZRF8 634 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 RHOT1Q8IXI2 618 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 AUTS2Q8WXX7 1259 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 RPF1Q9H9Y2 349 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 HMG20BQ9P0W2 317 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MYOM3Q5VTT5 1437 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 NCK1P16333 377 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 EFNA1P20827 205 aaPredicted RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PDIA3P30101 505 aaKnown RBP3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CDK8P49336 464 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 PLTPP55058 493 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 BLIDQ8IZY5 108 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 MED8Q96G25 268 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 CCDC3Q9BQI4 270 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 ABCG4Q9H172 646 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 GMEB2Q9UKD1 530 aa3.47□□□□□ -1.85
SYNE2-212ENST00000554584 FAM25EA8MYX2 175 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 OPLAHO14841 1288 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 IDH3BO43837 385 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 AKT2P31751 481 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 PHKA2P46019 1235 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 PDE6CP51160 858 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 MAPRE1Q15691 268 aaKnown RBP3.46□□□□□ -1.85
SYNE2-212ENST00000554584 C10orf120Q5SQS8 335 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 ENAHQ8N8S7 591 aaPredicted RBP3.46□□□□□ -1.85
SYNE2-212ENST00000554584 TRIM8Q9BZR9 551 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 EPB41L5Q9HCM4 733 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 DMTF1Q9Y222 760 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 CHKBQ9Y259 395 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 NR0B1P51843 470 aaKnown RBP3.46□□□□□ -1.85
SYNE2-212ENST00000554584 PLD1Q13393 1074 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 TOR1AIP1Q5JTV8 583 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 TMTC3Q6ZXV5 915 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 TNIP2Q8NFZ5 429 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 FAM162AQ96A26 154 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 FSD1LQ9BXM9 530 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 ING2Q9H160 280 aa3.46□□□□□ -1.85
SYNE2-212ENST00000554584 MAP3K20Q9NYL2 800 aaKnown RBP3.46□□□□□ -1.85
SYNE2-212ENST00000554584 INPPL1O15357 1258 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PAK2Q13177 524 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 NAA30Q147X3 362 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 AMZ1Q400G9 498 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 MTSS1LQ765P7 747 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 DNAJB7Q7Z6W7 309 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 KCTD4Q8WVF5 259 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 METTL22Q9BUU2 404 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.46□□□□□ -1.862e-6■■■■□ 25.6
SYNE2-212ENST00000554584 MRPL39Q9NYK5 338 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TPPPO94811 219 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TFPIP10646 304 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 HYAL2Q12891 473 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PLEKHG6Q3KR16 790 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 FASTKD1Q53R41 847 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 FAM26FQ5R3K3 315 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 OOSP2Q86WS3 158 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 LIX1Q8N485 282 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ZC3H7BQ9UGR2 993 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 DCTN4Q9UJW0 460 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ENO1P06733 434 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 CCNA1P78396 465 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 AASDHQ4L235 1098 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 MEI1Q5TIA1 1274 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 MFSD14CQ5VZR4 134 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 CCDC185Q8N715 623 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 CBX8Q9HC52 389 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 NEK6Q9HC98 313 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TLR8Q9NR97 1041 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 IMPACTQ9P2X3 320 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 PIN4Q9Y237 131 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 DOCK8Q8NF50 2099 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ERBB4Q15303 1308 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 TRPC1P48995 793 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 LSM3P62310 102 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 RBM39Q14498 530 aaKnown RBP3.46□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF568Q3ZCX4 644 aa3.46□□□□□ -1.86
SYNE2-212ENST00000554584 SCYL3Q8IZE3 742 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms