RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 IFT74Q96LB3 600 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 DDX23Q9BUQ8 820 aaKnown RBP15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 GZF1Q9H116 711 aaPredicted RBP15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 GOLGA2P5Q9HBQ8 144 aa15.26■□□□□ 0.03
SPTLC2-202ENST00000554365 ZNF292O60281 2723 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 PVALEFA0A1B0GWK0 134 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 MED19A0JLT2 244 aaPredicted RBP15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 TRAPPC3O43617 180 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 HIP1RO75146 1068 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 POU2F2P09086 479 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 BRCC3P46736 316 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 ZNF131P52739 623 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 PUM1Q14671 1186 aaKnown RBP eCLIP15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 KCNB1Q14721 858 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 KMT5BQ4FZB7 885 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 ATF7IP2Q5U623 682 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 TPRG1Q6ZUI0 275 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 ANKS3Q6ZW76 656 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 SUMF1Q8NBK3 374 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 SMARCE1Q969G3 411 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 DDX27Q96GQ7 796 aaKnown RBP15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 UROC1Q96N76 676 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 GSDMAQ96QA5 445 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 PPP1R10Q96QC0 940 aaKnown RBP15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 LTB4R2Q9NPC1 389 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 FBXO4Q9UKT5 387 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 DOCK6Q96HP0 2047 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 VWA8A3KMH1 1905 aa15.25■□□□□ 0.03
SPTLC2-202ENST00000554365 EP300Q09472 2414 aaPredicted RBP15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 MIA3Q5JRA6 1907 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 BIN1O00499 593 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 RHOBTB3O94955 611 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 LETM1O95202 739 aaPredicted RBP15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 SMC2O95347 1197 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 RHOP08100 348 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 EFNA5P52803 228 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 ARPP19P56211 112 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 ZNF445P59923 1031 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 MORC3Q14149 939 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 UPP1Q16831 310 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 ZNF528Q3MIS6 628 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 ZBTB41Q5SVQ8 909 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 APBB1IPQ7Z5R6 666 aaPredicted RBP15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 FIZ1Q96SL8 496 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 TIPINQ9BVW5 301 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 OSBPL6Q9BZF3 934 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 PLA2G2FQ9BZM2 168 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 NCDNQ9UBB6 729 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 ODF2LQ9ULJ1 636 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 BACE2Q9Y5Z0 518 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 WDR87Q6ZQQ6 2873 aa15.24■□□□□ 0.03
SPTLC2-202ENST00000554365 K7ERI5 159 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 ECI2O75521 394 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 LRG1P02750 347 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 KRT18P05783 430 aaKnown RBP15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 IDEP14735 1019 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 TARSP26639 723 aaKnown RBP15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 ELF1P32519 619 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 MAGEA9P43362 315 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 YARSP54577 528 aaKnown RBP15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 OSTNP61366 133 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 SLC5A9Q2M3M2 681 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 ISM2Q6H9L7 571 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 CD300LGQ6UXG3 332 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 RTL10Q7L3V2 364 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 CEP120Q8N960 986 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 C3orf58Q8NDZ4 430 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 ATRIPQ8WXE1 791 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 KIFAP3Q92845 792 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 HPS3Q969F9 1004 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 FGFBP2Q9BYJ0 223 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 HEBP1Q9NRV9 189 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 PANK4Q9NVE7 773 aa15.23■□□□□ 0.03
SPTLC2-202ENST00000554365 DNAH14Q0VDD8 3507 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 SMIM28A0A1B0GU29 152 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 PRRG1O14668 218 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 SPTLC1O15269 473 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 NCAM2O15394 837 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 CEBPBP17676 345 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 PTPN2P17706 415 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 ROR1Q01973 937 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 TYRO3Q06418 890 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 SOX4Q06945 474 aaPredicted RBP15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 ZNF568Q3ZCX4 644 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 VARS2Q5ST30 1063 aaKnown RBP15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 TANGO2Q6ICL3 276 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 TSSK4Q6SA08 328 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 ZNF852Q6ZMS4 543 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 SFR1Q86XK3 245 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 CCDC65Q8IXS2 484 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 TRIML1Q8N9V2 468 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 KIAA0895Q8NCT3 520 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 GLIS3Q8NEA6 775 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 CORO1BQ9BR76 489 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 CCDC94Q9BW85 323 aaPredicted RBP15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 TOPORSQ9NS56 1045 aaPredicted RBP15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 GDE1Q9NZC3 331 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 TNFSF13BQ9Y275 285 aa15.22■□□□□ 0.03
SPTLC2-202ENST00000554365 PCDHGA2Q9Y5H1 932 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms