RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 PPM1AP35813 382 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 STAT1P42224 750 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 MAGEA10P43363 369 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-210ENST00000553950 BTG3Q14201 252 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-210ENST00000553950 WDR72Q3MJ13 1102 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 DCLRE1AQ6PJP8 1040 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 C16orf59Q7L2K0 433 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 COLGALT2Q8IYK4 626 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 TOP6BLQ8N6T0 577 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 CCDC112Q8NEF3 446 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 SYN2Q92777 582 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-210ENST00000553950 RNPC3Q96LT9 517 aaKnown RBP15.55■□□□□ 0.08
SHMT2-210ENST00000553950 ZBED2Q9BTP6 218 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 PI4K2AQ9BTU6 479 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 NAA15Q9BXJ9 866 aaKnown RBP15.55■□□□□ 0.08
SHMT2-210ENST00000553950 BCO2Q9BYV7 579 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 GOLGA2P5Q9HBQ8 144 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 UBE2TQ9NPD8 197 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-210ENST00000553950 MIOSQ9NXC5 875 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 DSEQ9UL01 958 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 RWDD3Q9Y3V2 267 aa15.55■□□□□ 0.08
SHMT2-210ENST00000553950 SF3B1O75533 1304 aaKnown RBP eCLIP15.54■□□□□ 0.08
SHMT2-210ENST00000553950 F8VZ95 297 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 HUS1O60921 280 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 B3GAT3O94766 335 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 NOL4O94818 638 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 CASP14P31944 242 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 KRT9P35527 623 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 ASPAP45381 313 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 OR1G1P47890 313 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 ALDH7A1P49419 539 aaKnown RBP15.54■□□□□ 0.08
SHMT2-210ENST00000553950 AARSP49588 968 aaKnown RBP eCLIP15.54■□□□□ 0.08
SHMT2-210ENST00000553950 CLCNKBP51801 687 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 LILRA4P59901 499 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 HTRA4P83105 476 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-210ENST00000553950 LRMPQ12912 555 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 ARID5BQ14865 1188 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 RASIP1Q5U651 963 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 IQCEQ6IPM2 695 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 PHLDB3Q6NSJ2 640 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 HERC6Q8IVU3 1022 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 ARHGEF19Q8IW93 802 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 TMEM86AQ8N2M4 240 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 APPL2Q8NEU8 664 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 SHC3Q92529 594 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 FAM84AQ96KN4 292 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 PANX2Q96RD6 677 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 CXCL16Q9H2A7 254 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 NLRC4Q9NPP4 1024 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 ABHD10Q9NUJ1 306 aa15.54■□□□□ 0.08
SHMT2-210ENST00000553950 NXF1Q9UBU9 619 aaKnown RBP15.54■□□□□ 0.08
SHMT2-210ENST00000553950 ALDH2P05091 517 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 FERP16591 822 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 AFF1P51825 1210 aaKnown RBP15.53■□□□□ 0.08
SHMT2-210ENST00000553950 EPHB4P54760 987 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 JAM2P57087 298 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 BPIFB4P59827 614 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 PAN2Q504Q3 1202 aaKnown RBP15.53■□□□□ 0.08
SHMT2-210ENST00000553950 SPOUT1Q5T280 376 aaKnown RBP15.53■□□□□ 0.08
SHMT2-210ENST00000553950 SFMBT2Q5VUG0 894 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 SPOPLQ6IQ16 392 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 DPY19L2P1Q6NXN4 242 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 PDXDC1Q6P996 788 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 DSTYKQ6XUX3 929 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 RRAGAQ7L523 313 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 OR8K1Q8NGG5 319 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 ZNF558Q96NG5 402 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 MMS19Q96T76 1030 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 DNAJC7Q99615 494 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 RAD9AQ99638 391 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 NRDE2Q9H7Z3 1164 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 APOBEC3GQ9HC16 384 aaKnown RBP15.53■□□□□ 0.08
SHMT2-210ENST00000553950 FAN1Q9Y2M0 1017 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 SNX9Q9Y5X1 595 aa15.53■□□□□ 0.08
SHMT2-210ENST00000553950 BZW2Q9Y6E2 419 aaKnown RBP15.53■□□□□ 0.08
SHMT2-210ENST00000553950 LRRC53A6NM62 1247 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 EPHB6O15197 1021 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 TLL1O43897 1013 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 TACC1O75410 805 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 DDHD2O94830 711 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 KIF4AO95239 1232 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 SOX5P35711 763 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 RGS19P49795 217 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 GATMP50440 423 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 FXR1P51114 621 aaKnown RBP eCLIP15.52■□□□□ 0.08
SHMT2-210ENST00000553950 INCA1Q0VD86 236 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 DRAP1Q14919 205 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-210ENST00000553950 ASIC2Q16515 512 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 PTPN21Q16825 1174 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 ARHGAP44Q17R89 818 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 SCARA5Q6ZMJ2 495 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 METTL23Q86XA0 190 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 ZNF280BQ86YH2 543 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 FIBCD1Q8N539 461 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 SP7Q8TDD2 431 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-210ENST00000553950 CPLX3Q8WVH0 158 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 BAP1Q92560 729 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 SUSD3Q96L08 255 aa15.52■□□□□ 0.08
SHMT2-210ENST00000553950 UBE2OQ9C0C9 1292 aaKnown RBP15.52■□□□□ 0.08
SHMT2-210ENST00000553950 ADAM28Q9UKQ2 775 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms