RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 RPL9P32969 192 aaKnown RBP9.93□□□□□ -0.82
SYNE2-209ENST00000553308 CCT6AP40227 531 aaKnown RBP9.93□□□□□ -0.82
SYNE2-209ENST00000553308 KPNA1P52294 538 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-209ENST00000553308 ST3GAL1Q11201 340 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 LRRC32Q14392 662 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 ANKRD1Q15327 319 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 SEZ6Q53EL9 994 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 HAUS3Q68CZ6 603 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 LONP2Q86WA8 852 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 TMC8Q8IU68 726 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 YAF2Q8IY57 180 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 DAW1Q8N136 415 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 FAM160A2Q8N612 972 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-209ENST00000553308 BEST2Q8NFU1 509 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 TTC8Q8TAM2 541 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 ZFYVE19Q96K21 471 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 ACAP3Q96P50 834 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 PGLYRP2Q96PD5 576 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 LRRC3Q9BY71 257 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 MRPL4Q9BYD3 311 aaKnown RBP9.93□□□□□ -0.82
SYNE2-209ENST00000553308 DNAJC25Q9H1X3 360 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 CRISPLD1Q9H336 500 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 DDX19AQ9NUU7 478 aaKnown RBP9.93□□□□□ -0.82
SYNE2-209ENST00000553308 ARHGAP28Q9P2N2 729 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 PCDHB8Q9UN66 801 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 CITO14578 2027 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 MAP1BP46821 2468 aaKnown RBP9.93□□□□□ -0.82
SYNE2-209ENST00000553308 RALGAPA1Q6GYQ0 2036 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 SPECC1L-ADORA2AF8WAN1 911 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 CHADO15335 359 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 HIP1RO75146 1068 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 MUTP22033 750 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 CNR2P34972 360 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 MLLT6P55198 1093 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-209ENST00000553308 FCHO2Q0JRZ9 810 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 MAPK7Q13164 816 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 DMP1Q13316 513 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-209ENST00000553308 SF3A2Q15428 464 aaKnown RBP9.92□□□□□ -0.82
SYNE2-209ENST00000553308 CCDC6Q16204 474 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 SLC10A6Q3KNW5 377 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 MPZL3Q6UWV2 235 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 CEP68Q76N32 757 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 ARID3BQ8IVW6 561 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-209ENST00000553308 APPL2Q8NEU8 664 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 E2F7Q96AV8 911 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 MSANTD3Q96H12 275 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 ZBTB45Q96K62 511 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-209ENST00000553308 LRRC3BQ96PB8 259 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 TCHPQ9BT92 498 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 MKNK1Q9BUB5 465 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 RUSC1Q9BVN2 902 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 C8orf33Q9H7E9 229 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-209ENST00000553308 KMT5AQ9NQR1 393 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 GTSE1Q9NYZ3 720 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 ANKFY1Q9P2R3 1169 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 DAXXQ9UER7 740 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-209ENST00000553308 MAFFQ9ULX9 164 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 KIAA1024Q9UPX6 916 aa9.92□□□□□ -0.82
SYNE2-209ENST00000553308 TIMM13Q9Y5L4 95 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-209ENST00000553308 MYBPHLA2RUH7 354 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 E9PMD0 336 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 SLC16A4O15374 487 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 MARCKSP29966 332 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-209ENST00000553308 FXR2P51116 673 aaKnown RBP eCLIP9.91□□□□□ -0.823e-6■■■■□ 19.7
SYNE2-209ENST00000553308 YWHAHQ04917 246 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-209ENST00000553308 SPAG1Q07617 926 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 DUSP4Q13115 394 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 CCINQ13939 588 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 NBR1Q14596 966 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 PON2Q15165 354 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 AASDHQ4L235 1098 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-209ENST00000553308 DGKKQ5KSL6 1271 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 TTC38Q5R3I4 469 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 N4BP2L1Q5TBK1 243 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-209ENST00000553308 IL31Q6EBC2 164 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 PKN3Q6P5Z2 889 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 C1orf228Q6PIY5 440 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 GAREM2Q75VX8 874 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 WDR5BQ86VZ2 330 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 RALGPS2Q86X27 583 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-209ENST00000553308 TTC9BQ8N6N2 239 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 FAM200AQ8TCP9 573 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 SNX29Q8TEQ0 813 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 GPR88Q9GZN0 384 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 RXFP3Q9NSD7 469 aa9.91□□□□□ -0.82
SYNE2-209ENST00000553308 NUP210Q8TEM1 1887 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-209ENST00000553308 GREB1Q4ZG55 1949 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 KIF26AQ9ULI4 1882 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-209ENST00000553308 PP2D1A8MPX8 630 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 M0QZQ0 153 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 AXIN1O15169 862 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 EXTL3O43909 919 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 SOAT2O75908 522 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 OAZ2O95190 189 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 PRAMEF12O95522 483 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 CXCL8P10145 99 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 PMLP29590 882 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 PXNP49023 591 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-209ENST00000553308 EPHB3P54753 998 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms