RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NIPA1Q7RTP0 329 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 RABEPKQ7Z6M1 372 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 SYT12Q8IV01 421 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 CCDC60Q8IWA6 550 aaPredicted RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 EXOC8Q8IYI6 725 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 LRRC71Q8N4P6 559 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 LINC01465Q8N7H1 131 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 LNX1Q8TBB1 728 aaPredicted RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 PIBF1Q8WXW3 757 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 WBP1Q96G27 269 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 CRELD1Q96HD1 420 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 B3GALT6Q96L58 329 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 GAD1Q99259 594 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 JPH2Q9BR39 696 aaPredicted RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 CORO1BQ9BR76 489 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 POLMQ9NP87 494 aaPredicted RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 ZBTB40Q9NUA8 1239 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 THG1LQ9NWX6 298 aaKnown RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 GABBR1Q9UBS5 961 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 GIT1Q9Y2X7 761 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 SAMM50Q9Y512 469 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 DENND4AQ7Z401 1863 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 A0A087WZ62 844 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 WDR27A2RRH5 827 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 TRABD2BA6NFA1 517 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 SLC38A8A6NNN8 435 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 ENO4A6NNW6 628 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 B8ZZF3 427 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 E9PAM4 449 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 DDX39AO00148 427 aaKnown RBP5.75□□□□□ -1.49
CKAP4-203ENST00000553039 PRRG1O14668 218 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 DCLK1O15075 740 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 CCNE2O96020 404 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 SYPP08247 313 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 ENGP17813 658 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 FCARP24071 287 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 HOXD12P35452 270 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 VIPR2P41587 438 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 CSRP3P50461 194 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 AFF1P51825 1210 aaKnown RBP5.75□□□□□ -1.49
CKAP4-203ENST00000553039 DGKEP52429 567 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 GDF10P55107 478 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 ARID5AQ03989 594 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 ITGB3BPQ13352 177 aaPredicted RBP5.75□□□□□ -1.49
CKAP4-203ENST00000553039 IMMTQ16891 758 aaKnown RBP5.75□□□□□ -1.49
CKAP4-203ENST00000553039 TAF1BQ53T94 588 aaPredicted RBP5.75□□□□□ -1.49
CKAP4-203ENST00000553039 TSHZ3Q63HK5 1081 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 EGFLAMQ63HQ2 1017 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 LMBRD2Q68DH5 695 aaPredicted RBP5.75□□□□□ -1.49
CKAP4-203ENST00000553039 SLC23A3Q6PIS1 610 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 ZNF662Q6ZS27 426 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 LPCAT2Q7L5N7 544 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 GPR155Q7Z3F1 870 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 SRGAP1Q7Z6B7 1085 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 CATIPQ7Z7H3 387 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 RHPN2Q8IUC4 686 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 TBC1D10CQ8IV04 446 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 GALNT15Q8N3T1 639 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 ZNF461Q8TAF7 563 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 KCTD15Q96SI1 283 aaPredicted RBP5.75□□□□□ -1.49
CKAP4-203ENST00000553039 FDXACB1Q9BRP7 624 aaPredicted RBP5.75□□□□□ -1.49
CKAP4-203ENST00000553039 PI4K2AQ9BTU6 479 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 GLT8D2Q9H1C3 349 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 DCTPP1Q9H773 170 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 C2orf42Q9NWW7 574 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 SUCLA2Q9P2R7 463 aaPredicted RBP5.75□□□□□ -1.49
CKAP4-203ENST00000553039 MAFFQ9ULX9 164 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 SLC6A14Q9UN76 642 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 AK5Q9Y6K8 562 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 DMXL2Q8TDJ6 3036 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 APC2O95996 2303 aa5.75□□□□□ -1.49
CKAP4-203ENST00000553039 PTPN13Q12923 2485 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 CACNA1EQ15878 2313 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 ARHGEF37A1IGU5 675 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 PATE3B3GLJ2 98 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 ASAP2O43150 1006 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 TRAPPC3O43617 180 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 CYTH3O43739 400 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 FTH1P19P0C7X4 201 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 CEBPBP17676 345 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 DRD1P21728 446 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 AXLP30530 894 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 FCHO2Q0JRZ9 810 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 HSP90AA2PQ14568 343 aaPredicted RBP5.74□□□□□ -1.49
CKAP4-203ENST00000553039 SART3Q15020 963 aaKnown RBP5.74□□□□□ -1.49
CKAP4-203ENST00000553039 DUOXA1Q1HG43 343 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 SLC5A9Q2M3M2 681 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 ITPRIPL2Q3MIP1 535 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 INTS6LQ5JSJ4 861 aaKnown RBP5.74□□□□□ -1.49
CKAP4-203ENST00000553039 PRSS36Q5K4E3 855 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 RTP2Q5QGT7 225 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 PMS2CLQ68D20 193 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 TOGARAM2Q6ZUX3 1019 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 SYT13Q7L8C5 426 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 TMPRSS7Q7RTY8 843 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 PLA2G4DQ86XP0 818 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 ZNF654Q8IZM8 581 aa5.74□□□□□ -1.49
CKAP4-203ENST00000553039 CTCFLQ8NI51 663 aaPredicted RBP5.74□□□□□ -1.49
CKAP4-203ENST00000553039 ZSCAN18Q8TBC5 510 aaPredicted RBP5.74□□□□□ -1.49
CKAP4-203ENST00000553039 PIP4K2CQ8TBX8 421 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms