RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 ARMCX3Q9UH62 379 aaPredicted RBP20.12■□□□□ 0.81
DDX54-209ENST00000551912 PCDHB8Q9UN66 801 aa20.12■□□□□ 0.81
DDX54-209ENST00000551912 SCN1AP35498 2009 aa20.12■□□□□ 0.81
DDX54-209ENST00000551912 SPTLC1O15269 473 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 PHACTR2O75167 634 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 TRIM49P0CI25 452 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 TRIM49CP0CI26 452 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 NRIP1P48552 1158 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 MCCD1P59942 119 aaPredicted RBP20.11■□□□□ 0.81
DDX54-209ENST00000551912 CREMQ03060 361 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 HYAL1Q12794 435 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 MYO1EQ12965 1108 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 BIRC3Q13489 604 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 CCDC40Q4G0X9 1142 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 C1orf220Q5T0J3 134 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 SCARA3Q6AZY7 606 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 FRMD5Q7Z6J6 570 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 APPL2Q8NEU8 664 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 PIK3R5Q8WYR1 880 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 SENP8Q96LD8 212 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 CDCA3Q99618 268 aaPredicted RBP20.11■□□□□ 0.81
DDX54-209ENST00000551912 METTL14Q9HCE5 456 aaKnown RBP20.11■□□□□ 0.81
DDX54-209ENST00000551912 ANO10Q9NW15 660 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 PRUNE2Q8WUY3 3088 aa20.11■□□□□ 0.81
DDX54-209ENST00000551912 ARHGEF37A1IGU5 675 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 KPNA7A9QM74 516 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 PER2O15055 1255 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 NCK2O43639 380 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 LETM1O95202 739 aaPredicted RBP20.1■□□□□ 0.81
DDX54-209ENST00000551912 GNA14O95837 355 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 C4BPAP04003 597 aaKnown RBP20.1■□□□□ 0.81
DDX54-209ENST00000551912 CNPP09543 421 aaKnown RBP20.1■□□□□ 0.81
DDX54-209ENST00000551912 ODC1P11926 461 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 TRPC3Q13507 836 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 SKIV2LQ15477 1246 aaKnown RBP20.1■□□□□ 0.81
DDX54-209ENST00000551912 PSMD5Q16401 504 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 DUSP6Q16828 381 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 TPD52L1Q16890 204 aaPredicted RBP20.1■□□□□ 0.81
DDX54-209ENST00000551912 TDRD10Q5VZ19 366 aaKnown RBP20.1■□□□□ 0.81
DDX54-209ENST00000551912 PRSS55Q6UWB4 352 aaPredicted RBP20.1■□□□□ 0.81
DDX54-209ENST00000551912 ANKS3Q6ZW76 656 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 LNX1Q8TBB1 728 aaPredicted RBP20.1■□□□□ 0.81
DDX54-209ENST00000551912 MED15Q96RN5 788 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 IGFLR1Q9H665 355 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 RXFP1Q9HBX9 757 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 VWA8A3KMH1 1905 aa20.1■□□□□ 0.81
DDX54-209ENST00000551912 FSD2A1L4K1 749 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 CYB561D2O14569 222 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 STX10O60499 249 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 CST3P01034 146 aaPredicted RBP20.09■□□□□ 0.81
DDX54-209ENST00000551912 GTF2H1P32780 548 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 NFKBIBQ15653 356 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 ZACNQ401N2 412 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 DCAF17Q5H9S7 520 aaPredicted RBP20.09■□□□□ 0.81
DDX54-209ENST00000551912 VARS2Q5ST30 1063 aaKnown RBP20.09■□□□□ 0.81
DDX54-209ENST00000551912 TCERG1LQ5VWI1 586 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 SV2AQ7L0J3 742 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 HPDLQ96IR7 371 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 KLHL5Q96PQ7 755 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 FNIP2Q9P278 1114 aa20.09■□□□□ 0.81
DDX54-209ENST00000551912 TEX28O15482 410 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 CLASP2O75122 1294 aaKnown RBP20.08■□□□□ 0.81
DDX54-209ENST00000551912 ADH1AP07327 375 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 TYMPP19971 482 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 KLRC2P26717 231 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 GTF2F1P35269 517 aaKnown RBP eCLIP20.08■□□□□ 0.81
DDX54-209ENST00000551912 GCLMP48507 274 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 TYRO3Q06418 890 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 PPP3CAQ08209 521 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 NCOA4Q13772 614 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 C15orf39Q6ZRI6 1047 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 PPFIBP1Q86W92 1011 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 MMRN2Q9H8L6 949 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 TMEM8AQ9HCN3 771 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 MTRRQ9UBK8 725 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 DSEQ9UL01 958 aa20.08■□□□□ 0.81
DDX54-209ENST00000551912 TIMM13Q9Y5L4 95 aaPredicted RBP20.08■□□□□ 0.81
DDX54-209ENST00000551912 H7C4K7 107 aa20.07■□□□□ 0.8
DDX54-209ENST00000551912 CCDC192P0DO97 292 aa20.07■□□□□ 0.8
DDX54-209ENST00000551912 RPL17P18621 184 aaKnown RBP20.07■□□□□ 0.8
DDX54-209ENST00000551912 ATICP31939 592 aa20.07■□□□□ 0.8
DDX54-209ENST00000551912 NDUFV1P49821 464 aa20.07■□□□□ 0.8
DDX54-209ENST00000551912 MARSP56192 900 aaKnown RBP20.07■□□□□ 0.8
DDX54-209ENST00000551912 YWHAHQ04917 246 aaPredicted RBP20.07■□□□□ 0.8
DDX54-209ENST00000551912 MRPL58Q14197 206 aaKnown RBP20.07■□□□□ 0.8
DDX54-209ENST00000551912 KRT39Q6A163 491 aa20.07■□□□□ 0.8
DDX54-209ENST00000551912 EFHBQ8N7U6 833 aa20.07■□□□□ 0.8
DDX54-209ENST00000551912 GDAP2Q9NXN4 497 aa20.07■□□□□ 0.8
DDX54-209ENST00000551912 SNX9Q9Y5X1 595 aa20.07■□□□□ 0.8
DDX54-209ENST00000551912 BACE2Q9Y5Z0 518 aa20.07■□□□□ 0.8
DDX54-209ENST00000551912 VNN1O95497 513 aa20.06■□□□□ 0.8
DDX54-209ENST00000551912 STAU1O95793 577 aaKnown RBP20.06■□□□□ 0.8
DDX54-209ENST00000551912 CYP11A1P05108 521 aa20.06■□□□□ 0.8
DDX54-209ENST00000551912 PIK3CAP42336 1068 aa20.06■□□□□ 0.8
DDX54-209ENST00000551912 MXI1P50539 228 aa20.06■□□□□ 0.8
DDX54-209ENST00000551912 MYL6P60660 151 aa20.06■□□□□ 0.8
DDX54-209ENST00000551912 COL19A1Q14993 1142 aa20.06■□□□□ 0.8
DDX54-209ENST00000551912 OVOS1Q6IE37 1185 aa20.06■□□□□ 0.8
DDX54-209ENST00000551912 ZNF280DQ6N043 979 aa20.06■□□□□ 0.8
DDX54-209ENST00000551912 C11orf57Q6ZUT1 292 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms