RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 KPNA7A9QM74 516 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 M0QZQ0 153 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 PHACTR2O75167 634 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 TAF6P49848 677 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 MCCD1P59942 119 aaPredicted RBP16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 BFSP1Q12934 665 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 ADAM15Q13444 863 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 KLHL40Q2TBA0 621 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 VARS2Q5ST30 1063 aaKnown RBP16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 TDRD10Q5VZ19 366 aaKnown RBP16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 FOXR2Q6PJQ5 311 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 SASS6Q6UVJ0 657 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 RSPO2Q6UXX9 243 aaPredicted RBP16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 EP400NLQ6ZTU2 488 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 SV2AQ7L0J3 742 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 GLYCTKQ8IVS8 523 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 VN1R2Q8NFZ6 395 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 PIK3R5Q8WYR1 880 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 CEP63Q96MT8 703 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 CLSTN3Q9BQT9 956 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 PCDHB8Q9UN66 801 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 SSX2IPQ9Y2D8 614 aa16.34■□□□□ 0.21
SMARCD1-211ENST00000551497 CYB561D2O14569 222 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 IKBKBO14920 756 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 VNN1O95497 513 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 KLRC2P26717 231 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 GCLMP48507 274 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 MYL6P60660 151 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 DLX2Q07687 328 aaPredicted RBP16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 BIRC3Q13489 604 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 MRPL58Q14197 206 aaKnown RBP16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 PSMD5Q16401 504 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 LLGL2Q6P1M3 1020 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 PALB2Q86YC2 1186 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 LRRC52Q8N7C0 313 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 SLC22A17Q8WUG5 538 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 HPDLQ96IR7 371 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 EMILIN2Q9BXX0 1053 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 MMRN2Q9H8L6 949 aa16.33■□□□□ 0.2
SMARCD1-211ENST00000551497 SYN3O14994 580 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 SLC16A3O15427 465 aaKnown RBP16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 GLP2RO95838 553 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 SPATA31D3P0C874 917 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 PTMSP20962 102 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 ERCC5P28715 1186 aaPredicted RBP16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 LTBRP36941 435 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 AP3M2P53677 418 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 TRPC3Q13507 836 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 KCNC3Q14003 757 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 NFKBIBQ15653 356 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 CTC1Q2NKJ3 1217 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 ZACNQ401N2 412 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 SV2CQ496J9 727 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 CCDC40Q4G0X9 1142 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 WSCD1Q658N2 575 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 C15orf39Q6ZRI6 1047 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 SPATA31D4Q6ZUB0 917 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 C11orf57Q6ZUT1 292 aaPredicted RBP16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 GPR65Q8IYL9 337 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 EFHBQ8N7U6 833 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 APPL2Q8NEU8 664 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 PPP2R3CQ969Q6 453 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 CLDND1Q9NY35 253 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 FNIP2Q9P278 1114 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 ARMCX3Q9UH62 379 aaPredicted RBP16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 R3HCC1Q9Y3T6 440 aaKnown RBP16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 A0A0C4DFX4 3053 aa16.32■□□□□ 0.2
SMARCD1-211ENST00000551497 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 TBC1D4O60343 1298 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 LRRN2O75325 713 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 EPCAMP16422 314 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 PAX3P23760 479 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 OR1D2P34982 312 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 PNPLA4P41247 253 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 ENPEPQ07075 957 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 NCOA4Q13772 614 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 COL19A1Q14993 1142 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 DCAF17Q5H9S7 520 aaPredicted RBP16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 TCERG1LQ5VWI1 586 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 ANKS3Q6ZW76 656 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 FRMD5Q7Z6J6 570 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 IRF2BP1Q8IU81 584 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 CREBRFQ8IUR6 639 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 SYAP1Q96A49 352 aaPredicted RBP16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 PABPC5Q96DU9 382 aaKnown RBP16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 ZNF560Q96MR9 790 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 CDCA3Q99618 268 aaPredicted RBP16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 XYLT2Q9H1B5 865 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 MTRRQ9UBK8 725 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 DACH1Q9UI36 760 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 FBXL5Q9UKA1 691 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 SNX9Q9Y5X1 595 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 BACE2Q9Y5Z0 518 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 HCFC2Q9Y5Z7 792 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 REV3LO60673 3130 aa16.31■□□□□ 0.2
SMARCD1-211ENST00000551497 OAZ2O95190 189 aa16.3■□□□□ 0.2
SMARCD1-211ENST00000551497 HLA-DRAP01903 254 aa16.3■□□□□ 0.2
SMARCD1-211ENST00000551497 ODC1P11926 461 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms