RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 GAGE12BA1L429 117 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 GAGE12HA6NDE8 117 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 CAPN8A6NHC0 703 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 PRSS29PA6NIE9 313 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 A6NNZ2 444 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 FRS3O43559 492 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 PRC1O43663 620 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 CAND2O75155 1236 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 MATN4O95460 622 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 PEX11BO96011 259 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 GNAI3P08754 354 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 CKBP12277 381 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 APOBEC3AP31941 199 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-215ENST00000551391 CACNB3P54284 484 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 TBX4P57082 545 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 GNAI1P63096 354 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 UTP14CQ5TAP6 766 aaKnown RBP4.4□□□□□ -1.71
SCAF11-215ENST00000551391 MAEAQ7L5Y9 396 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 MRGPRGQ86SM5 289 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 PPP1R3BQ86XI6 285 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 PGBD4Q96DM1 585 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 BRD9Q9H8M2 597 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 GPR35Q9HC97 309 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 SARS2Q9NP81 518 aaKnown RBP4.4□□□□□ -1.71
SCAF11-215ENST00000551391 PARPBPQ9NWS1 579 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 CEP72Q9P209 647 aa4.4□□□□□ -1.71
SCAF11-215ENST00000551391 EIF2B4Q9UI10 523 aaKnown RBP4.4□□□□□ -1.71
SCAF11-215ENST00000551391 AHRRA9YTQ3 701 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 TPP1O14773 563 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 PHGDHO43175 533 aaKnown RBP4.39□□□□□ -1.71
SCAF11-215ENST00000551391 RAMP2O60895 175 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 ITGB1P05556 798 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 MYBP10242 640 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 RHCEP18577 417 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 SLC6A2P23975 617 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 FAM193AP78312 1265 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 RHDQ02161 417 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 TCF15Q12870 199 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 GALEQ14376 348 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 CCSAPQ6IQ19 270 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-215ENST00000551391 GDF7Q7Z4P5 450 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 SH2D3CQ8N5H7 860 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 ANKS1AQ92625 1134 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 DDX17Q92841 729 aaKnown RBP4.39□□□□□ -1.71
SCAF11-215ENST00000551391 SCAMP4Q969E2 229 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 NEU1Q99519 415 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 SARGQ9BW04 601 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 C1orf43Q9BWL3 253 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 SLC46A2Q9BY10 475 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 KLHL11Q9NVR0 708 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 SORCS3Q9UPU3 1222 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 ATP11BQ9Y2G3 1177 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 PCDHA1Q9Y5I3 950 aa4.39□□□□□ -1.71
SCAF11-215ENST00000551391 CDHR4A6H8M9 788 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 AGFG2O95081 481 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 PRSS23O95084 383 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 CHEK2O96017 543 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 GJB1P08034 283 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 SPATA31D3P0C874 917 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 RARBP10826 455 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 TRIM27P14373 513 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 NOMO3P69849 1222 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 SLFN5Q08AF3 891 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 LLGL1Q15334 1064 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 CNN3Q15417 329 aaKnown RBP4.38□□□□□ -1.71
SCAF11-215ENST00000551391 NOMO2Q5JPE7 1267 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 KHDC1LQ5JSQ8 128 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 TSHZ3Q63HK5 1081 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 SWSAP1Q6NVH7 229 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 DPY19L2P1Q6NXN4 242 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 DARS2Q6PI48 645 aaKnown RBP4.38□□□□□ -1.71
SCAF11-215ENST00000551391 SPATA31D4Q6ZUB0 917 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 LDLRAD3Q86YD5 345 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 FAM156AQ8NDB6 213 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 OR56A1Q8NGH5 318 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 TBC1D15Q8TC07 691 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 LARP4BQ92615 738 aaKnown RBP4.38□□□□□ -1.71
SCAF11-215ENST00000551391 TNPO1Q92973 898 aaKnown RBP4.38□□□□□ -1.71
SCAF11-215ENST00000551391 MRGPRX1Q96LB2 322 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 MED15Q96RN5 788 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 PNKPQ96T60 521 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 PRRX2Q99811 253 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 RNPEPQ9H4A4 650 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 ARMT1Q9H993 441 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 RSAD1Q9HA92 442 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 ATP6V0A4Q9HBG4 840 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 CNNM1Q9NRU3 951 aa4.38□□□□□ -1.71
SCAF11-215ENST00000551391 PIH1D1Q9NWS0 290 aaKnown RBP4.38□□□□□ -1.71
SCAF11-215ENST00000551391 GOLIM4O00461 696 aa4.37□□□□□ -1.71
SCAF11-215ENST00000551391 RNASET2O00584 256 aaKnown RBP4.37□□□□□ -1.71
SCAF11-215ENST00000551391 ZNF185O15231 689 aa4.37□□□□□ -1.71
SCAF11-215ENST00000551391 SCAF4O95104 1147 aaKnown RBP4.37□□□□□ -1.71
SCAF11-215ENST00000551391 AHSGP02765 367 aa4.37□□□□□ -1.71
SCAF11-215ENST00000551391 PHKG2P15735 406 aa4.37□□□□□ -1.71
SCAF11-215ENST00000551391 ARFIP2P53365 341 aa4.37□□□□□ -1.71
SCAF11-215ENST00000551391 PTTG1IPP53801 180 aa4.37□□□□□ -1.71
SCAF11-215ENST00000551391 RNASE9P60153 205 aaKnown RBP4.37□□□□□ -1.71
SCAF11-215ENST00000551391 POU6F2P78424 691 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-215ENST00000551391 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
SCAF11-215ENST00000551391 PDCD4Q53EL6 469 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms