RNA–Protein interactions for RNA: ENST00000550859.5

SMARCC2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-211ENST00000550859 REXO4Q9GZR2 422 aaKnown RBP5.6□□□□□ -1.51
SMARCC2-211ENST00000550859 LUC7L2Q9Y383 392 aaKnown RBP5.6□□□□□ -1.51
SMARCC2-211ENST00000550859 PCDHA13Q9Y5I0 950 aa5.6□□□□□ -1.51
SMARCC2-211ENST00000550859 ACTL7AQ9Y615 435 aa5.6□□□□□ -1.51
SMARCC2-211ENST00000550859 NEXMIFQ5QGS0 1516 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 FAM135BQ49AJ0 1406 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 CCDC154A6NI56 674 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 HTRA2O43464 458 aaPredicted RBP5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 ALDH1L1O75891 902 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 SPATA31D3P0C874 917 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 APOBEC3AP31941 199 aaPredicted RBP5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 PTGS2P35354 604 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 ALDH1A3P47895 512 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 CDC42EP1Q00587 391 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 UBXN2BQ14CS0 331 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 CRIP3Q6Q6R5 217 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 SPATA31D4Q6ZUB0 917 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 FTSJ3Q8IY81 847 aaKnown RBP5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 SYNE4Q8N205 404 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 ZNF276Q8N554 614 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 PHACTR3Q96KR7 559 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 PSMD1Q99460 953 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 TRPM5Q9NZQ8 1165 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 LIMCH1Q9UPQ0 1083 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 IPPQ9Y573 584 aa5.59□□□□□ -1.51
SMARCC2-211ENST00000550859 SPATA31E1Q6ZUB1 1445 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 ANKRD30BQ9BXX2 1392 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 SPHKAPQ2M3C7 1700 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 DRGXA6NNA5 263 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 NPIPB8E9PQR5 432 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 IL33O95760 270 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 CT47B1P0C2W7 299 aaPredicted RBP5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 ALAS1P13196 640 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 MCCP23508 829 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 PCSK1P29120 753 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 GDF5P43026 501 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 RNASE9P60153 205 aaKnown RBP5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 MTM1Q13496 603 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 ZNF529Q6P280 563 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 MED25Q71SY5 747 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 KRT28Q7Z3Y7 464 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 GDF7Q7Z4P5 450 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 TTC7BQ86TV6 843 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 CPA6Q8N4T0 437 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 NLGN4YQ8NFZ3 816 aaPredicted RBP5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 HAS1Q92839 578 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 TMX3Q96JJ7 454 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 SLC46A2Q9BY10 475 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 MAN1C1Q9NR34 630 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 FAM30AQ9NZY2 134 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 RUVBL1Q9Y265 456 aaKnown RBP5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 ATP11BQ9Y2G3 1177 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 HS3ST3A1Q9Y663 406 aa5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 CFAP20Q9Y6A4 193 aaKnown RBP5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 MED1Q15648 1581 aaPredicted RBP5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 NKTRP30414 1462 aaKnown RBP5.58□□□□□ -1.52
SMARCC2-211ENST00000550859 DHX57Q6P158 1386 aaKnown RBP5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 PIK3R4Q99570 1358 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 JCADQ9P266 1359 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 ROBO1Q9Y6N7 1651 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 AFF2P51816 1311 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 PNPLA7Q6ZV29 1317 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 LEFTY2O00292 366 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 RNASET2O00584 256 aaKnown RBP5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 SGTAO43765 313 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 DTNBO60941 627 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 FSHBP01225 129 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 AMY1AP04745 511 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 HLA-DOAP06340 250 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 MAKP20794 623 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 FPR1P21462 350 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 MCM7P33993 719 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 CHN2P52757 468 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 CTXN1P60606 82 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 MXRA7P84157 204 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 IL10RAQ13651 578 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 RAB39AQ14964 217 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 CSRP2Q16527 193 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 TMEM240Q5SV17 173 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 GADL1Q6ZQY3 521 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 SEM1Q6ZVN7 128 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 SYT12Q8IV01 421 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 CMTR2Q8IYT2 770 aaKnown RBP5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 ZGPATQ8N5A5 531 aaKnown RBP5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 ZNF483Q8TF39 744 aaPredicted RBP5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 STAG1Q8WVM7 1258 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 LRRC59Q96AG4 307 aaKnown RBP5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 HSPBAP1Q96EW2 488 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 CLPTM1LQ96KA5 538 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 NRDE2Q9H7Z3 1164 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 SLC2A4RGQ9NR83 387 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 IP6K2Q9UHH9 426 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 ANKRD6Q9Y2G4 727 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 C1orf167Q5SNV9 1468 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 MST1RQ04912 1400 aa5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 YTHDC2Q9H6S0 1430 aaKnown RBP5.57□□□□□ -1.52
SMARCC2-211ENST00000550859 LRPPRCP42704 1394 aaKnown RBP5.56□□□□□ -1.52
SMARCC2-211ENST00000550859 NRXN3Q9Y4C0 1643 aa5.56□□□□□ -1.52
SMARCC2-211ENST00000550859 E2F8A0AVK6 867 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms