RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 MRPL38Q96DV4 380 aaKnown RBP23.09■■□□□ 1.29
NEK3-202ENST00000550841 HPDLQ96IR7 371 aa23.09■■□□□ 1.29
NEK3-202ENST00000550841 TTPALQ9BTX7 342 aa23.09■■□□□ 1.29
NEK3-202ENST00000550841 MMRN2Q9H8L6 949 aa23.09■■□□□ 1.29
NEK3-202ENST00000550841 UNC80Q8N2C7 3258 aa23.09■■□□□ 1.29
NEK3-202ENST00000550841 KPNA7A9QM74 516 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 SYN3O14994 580 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 PMM2O15305 246 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 STAU1O95793 577 aaKnown RBP23.08■■□□□ 1.29
NEK3-202ENST00000550841 CST3P01034 146 aaPredicted RBP23.08■■□□□ 1.29
NEK3-202ENST00000550841 CTSAP10619 480 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 POU3F3P20264 500 aaPredicted RBP23.08■■□□□ 1.29
NEK3-202ENST00000550841 BRCC3P46736 316 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 MXI1P50539 228 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 NCOA4Q13772 614 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 SMC1AQ14683 1233 aaKnown RBP23.08■■□□□ 1.29
NEK3-202ENST00000550841 TIGD5Q53EQ6 642 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 LRSAM1Q6UWE0 723 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 AOPEPQ8N6M6 819 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 CCDC150Q8NCX0 1101 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 TAF4BQ92750 862 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 ENTPD7Q9NQZ7 604 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 MRPL17Q9NRX2 175 aaKnown RBP23.08■■□□□ 1.29
NEK3-202ENST00000550841 CHST7Q9NS84 486 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 SAMSN1Q9NSI8 373 aaKnown RBP23.08■■□□□ 1.29
NEK3-202ENST00000550841 FANCLQ9NW38 375 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 PCDHB8Q9UN66 801 aa23.08■■□□□ 1.29
NEK3-202ENST00000550841 KCNJ18B7U540 433 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 M0QZQ0 153 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 PPEF2O14830 753 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 P4HA2O15460 535 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 CXCL14O95715 111 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 URODP06132 367 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 TPM2P07951 284 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 CDK11BP21127 795 aaKnown RBP23.07■■□□□ 1.28
NEK3-202ENST00000550841 FGFR3P22607 806 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 IGFBP4P22692 258 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 DNAJB1P25685 340 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 GLUD2P49448 558 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 TPM4P67936 248 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 KCNH2Q12809 1159 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 KCNJ12Q14500 433 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 CEP57Q86XR8 500 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 TMEM130Q8N3G9 435 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 PPP2R3CQ969Q6 453 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 FAM84AQ96KN4 292 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 SENP8Q96LD8 212 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 TCF25Q9BQ70 676 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 VN1R3Q9BXE9 311 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 IMPG2Q9BZV3 1241 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 ZBP1Q9H171 429 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 TSPY26PQ9H489 355 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 GDAP2Q9NXN4 497 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 DSEQ9UL01 958 aa23.07■■□□□ 1.28
NEK3-202ENST00000550841 CYB561D2O14569 222 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 FSCN2O14926 492 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 AFPP02771 609 aaKnown RBP23.06■■□□□ 1.28
NEK3-202ENST00000550841 ODC1P11926 461 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 IGFBP6P24592 240 aaPredicted RBP23.06■■□□□ 1.28
NEK3-202ENST00000550841 PIK3CAP42336 1068 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 FMO5P49326 533 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 ERVFC1P60507 584 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 DSG1Q02413 1049 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 CREMQ03060 361 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 TCP11X2Q5H9J9 407 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 TJAP1Q5JTD0 557 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 CDKAL1Q5VV42 579 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 TAS1R1Q7RTX1 841 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 FBXL13Q8NEE6 735 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 IRAK3Q9Y616 596 aa23.06■■□□□ 1.28
NEK3-202ENST00000550841 PLXNA4Q9HCM2 1894 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 SCN1AP35498 2009 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 VNN1O95497 513 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 HLA-DRAP01903 254 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 FAM163BP0C2L3 166 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 P4HA1P13674 534 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 TYMPP19971 482 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 ZNF445P59923 1031 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 MYL6P60660 151 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 CAMK1Q14012 370 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 NCAPHQ15003 741 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 MAN2A1Q16706 1144 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 KIAA0319Q5VV43 1072 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 ANKS3Q6ZW76 656 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 DPH6Q7L8W6 267 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 METTL23Q86XA0 190 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 DHX40Q8IX18 779 aaKnown RBP23.05■■□□□ 1.28
NEK3-202ENST00000550841 MRPL43Q8N983 215 aaKnown RBP23.05■■□□□ 1.28
NEK3-202ENST00000550841 TUBGCP2Q9BSJ2 902 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 VRTNQ9H8Y1 702 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.05■■□□□ 1.28
NEK3-202ENST00000550841 RAB20Q9NX57 234 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 COQ4Q9Y3A0 265 aa23.05■■□□□ 1.28
NEK3-202ENST00000550841 H7C4K7 107 aa23.04■■□□□ 1.28
NEK3-202ENST00000550841 I3L4J1 428 aa23.04■■□□□ 1.28
NEK3-202ENST00000550841 SPTLC1O15269 473 aa23.04■■□□□ 1.28
NEK3-202ENST00000550841 HUS1O60921 280 aa23.04■■□□□ 1.28
NEK3-202ENST00000550841 CA8P35219 290 aa23.04■■□□□ 1.28
NEK3-202ENST00000550841 TNNC1P63316 161 aa23.04■■□□□ 1.28
NEK3-202ENST00000550841 ZNF699Q32M78 642 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms