RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 SPTLC1O15269 473 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 ITGB1P05556 798 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 PON1P27169 355 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 CTNNB1P35222 781 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 PNPLA4P41247 253 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 KLK7P49862 253 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 LILRA4P59901 499 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 TNNC1P63316 161 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 APBA1Q02410 837 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 TIGD5Q53EQ6 642 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 SCARA5Q6ZMJ2 495 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 CEP57Q86XR8 500 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 LRRC52Q8N7C0 313 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 CXorf38Q8TB03 319 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 TAF4BQ92750 862 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 TMEM169Q96HH4 297 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 C17orf80Q9BSJ5 609 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 PRO3102Q9H379 93 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 CERS4Q9HA82 394 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 MARCH5Q9NX47 278 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 SPG21Q9NZD8 308 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 ADAM28Q9UKQ2 775 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 SNX9Q9Y5X1 595 aa9.67□□□□□ -0.86
CACNB3-215ENST00000550190 CEP290O15078 2479 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 VWA8A3KMH1 1905 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 CYB561D2O14569 222 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 PMM2O15305 246 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 TRAPPC3O43617 180 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 HUS1O60921 280 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 ARHGEF15O94989 841 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 CSPG5O95196 566 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 ASS1P00966 412 aaKnown RBP9.66□□□□□ -0.86
CACNB3-215ENST00000550190 P4HA1P13674 534 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 CA8P35219 290 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 BMPR1AP36894 532 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 RAP1GAPP47736 663 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 NOP14P78316 857 aaKnown RBP9.66□□□□□ -0.86
CACNB3-215ENST00000550190 KRT17Q04695 432 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 ARHGAP44Q17R89 818 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 FAM171A1Q5VUB5 890 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 PPP2R2DQ66LE6 453 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 FUT10Q6P4F1 479 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 GJB7Q6PEY0 223 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 TRIM65Q6PJ69 517 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 CD300LGQ6UXG3 332 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 RRAGAQ7L523 313 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 SPRED2Q7Z698 418 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 TMEM173Q86WV6 379 aaPredicted RBP9.66□□□□□ -0.86
CACNB3-215ENST00000550190 ARHGEF19Q8IW93 802 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 SLC39A11Q8N1S5 342 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 PPM1KQ8N3J5 372 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 KLHL23Q8NBE8 558 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 NEK11Q8NG66 645 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 LMO3Q8TAP4 145 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 BCL7CQ8WUZ0 217 aaPredicted RBP9.66□□□□□ -0.86
CACNB3-215ENST00000550190 IGSF21Q96ID5 467 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 SENP8Q96LD8 212 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 ERGIC2Q96RQ1 377 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 TGS1Q96RS0 853 aaKnown RBP9.66□□□□□ -0.86
CACNB3-215ENST00000550190 XYLT2Q9H1B5 865 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 SLC28A3Q9HAS3 691 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 UBE2TQ9NPD8 197 aaPredicted RBP9.66□□□□□ -0.86
CACNB3-215ENST00000550190 FAM207AQ9NSI2 230 aaPredicted RBP9.66□□□□□ -0.86
CACNB3-215ENST00000550190 RWDD3Q9Y3V2 267 aa9.66□□□□□ -0.86
CACNB3-215ENST00000550190 TIMM13Q9Y5L4 95 aaPredicted RBP9.66□□□□□ -0.86
CACNB3-215ENST00000550190 CARNS1A5YM72 827 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 TMEM189-UBE2V1I3L0A0 370 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 FGF18O76093 207 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 STAU1O95793 577 aaKnown RBP9.65□□□□□ -0.86
CACNB3-215ENST00000550190 WEE2P0C1S8 567 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 DNAJB2P25686 324 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 PPM1AP35813 382 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 ZNF75DP51815 510 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 CDH8P55286 799 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 SMAD3P84022 425 aaKnown RBP9.65□□□□□ -0.86
CACNB3-215ENST00000550190 TAP1Q03518 808 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 PRPF38BQ5VTL8 546 aaKnown RBP9.65□□□□□ -0.86
CACNB3-215ENST00000550190 PHLDB3Q6NSJ2 640 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 METTL23Q86XA0 190 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 DRC7Q8IY82 874 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 APPL2Q8NEU8 664 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 ARNTL2Q8WYA1 636 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 CLP1Q92989 425 aaKnown RBP9.65□□□□□ -0.86
CACNB3-215ENST00000550190 TIFAQ96CG3 184 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 SUSD3Q96L08 255 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 B3GALT6Q96L58 329 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 SAMD11Q96NU1 681 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 GPR62Q9BZJ7 368 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 NIF3L1Q9GZT8 377 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 APOBEC3GQ9HC16 384 aaKnown RBP9.65□□□□□ -0.86
CACNB3-215ENST00000550190 ALG13Q9NP73 1137 aaKnown RBP9.65□□□□□ -0.86
CACNB3-215ENST00000550190 SIX2Q9NPC8 291 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 NLRC4Q9NPP4 1024 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 DNAJC12Q9UKB3 198 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 SIK3Q9Y2K2 1263 aa9.65□□□□□ -0.86
CACNB3-215ENST00000550190 MKI67P46013 3256 aaKnown RBP9.65□□□□□ -0.87
CACNB3-215ENST00000550190 SF3B1O75533 1304 aaKnown RBP eCLIP9.64□□□□□ -0.87
CACNB3-215ENST00000550190 TSC2P49815 1807 aa9.64□□□□□ -0.87
CACNB3-215ENST00000550190 A0A1W2PPC1 479 aa9.64□□□□□ -0.87
CACNB3-215ENST00000550190 A0A1W2PQC6 194 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms