RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 RAG1P15918 1043 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 ANXA13P27216 316 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 LRPAP1P30533 357 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 PNPLA4P41247 253 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 ASPAP45381 313 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 TNNC1P63316 161 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 SOX4Q06945 474 aaPredicted RBP12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 GRIK3Q13003 919 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 CNKSR3Q6P9H4 555 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 TOGARAM2Q6ZUX3 1019 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 VPS36Q86VN1 386 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 TMEM130Q8N3G9 435 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 GSTCDQ8NEC7 633 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 URGCPQ8TCY9 931 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 MIOSQ9NXC5 875 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 LRFN2Q9ULH4 789 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 POLIQ9UNA4 740 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 INPP5FQ9Y2H2 1132 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 PCDHB7Q9Y5E2 793 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 PCDHB4Q9Y5E5 795 aa12.37□□□□□ -0.43
CTDSP2-206ENST00000550144 TRIM43BA6NCK2 446 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 EIF3CLB5ME19 914 aaKnown RBP12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 PPEF2O14830 753 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 CYP26A1O43174 497 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 CCP110O43303 1012 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 ZSCAN12O43309 604 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 POMCP01189 267 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 CCDC175P0C221 793 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 ACO1P21399 889 aaKnown RBP12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 RPL9P32969 192 aaKnown RBP12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 TAF6P49848 677 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 AFF1P51825 1210 aaKnown RBP12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 KIF11P52732 1056 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 BPIFB4P59827 614 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 KRT83P78385 493 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 PTK2Q05397 1052 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 IKBKEQ14164 716 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 SPA17Q15506 151 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 NAB2Q15742 525 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 TCTN1Q2MV58 587 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 SV2CQ496J9 727 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 SCARA5Q6ZMJ2 495 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 ZNF571Q7Z3V5 609 aaPredicted RBP12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 TMEM199Q8N511 208 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 TRIM43Q96BQ3 446 aaPredicted RBP12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 EIF3CQ99613 913 aaKnown RBP12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 DESI2Q9BSY9 194 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 BCO2Q9BYV7 579 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 FAM124BQ9H5Z6 455 aaPredicted RBP12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 CYP3A43Q9HB55 503 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 GOLGA2P5Q9HBQ8 144 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 CISHQ9NSE2 258 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 TRIP11Q15643 1979 aa12.36□□□□□ -0.43
CTDSP2-206ENST00000550144 HOXA2O43364 376 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 WEE2P0C1S8 567 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 FGFR1P11362 822 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 CD58P19256 250 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 CLCN1P35523 988 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 PDE6CP51160 858 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 ASTE1Q2TB18 679 aaPredicted RBP12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 CLLU1OSQ5K130 101 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 MFSD5Q6N075 450 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 TMEM270Q6UE05 265 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 RPUSD2Q8IZ73 545 aaKnown RBP12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 ABI1Q8IZP0 508 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 CCAR2Q8N163 923 aaKnown RBP12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 C17orf53Q8N3J3 647 aaPredicted RBP12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 TTC39CQ8N584 583 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 UBR7Q8N806 425 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 RBBP8NLQ8NC74 664 aaPredicted RBP12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 DDX27Q96GQ7 796 aaKnown RBP12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 UROC1Q96N76 676 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 KCND1Q9NSA2 647 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 SPTLC3Q9NUV7 552 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 KANSL3Q9P2N6 904 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 PRKAG2Q9UGJ0 569 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 CNTN6Q9UQ52 1028 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 PPP2R2CQ9Y2T4 447 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 SNX9Q9Y5X1 595 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 ADGRG1Q9Y653 693 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 SCN5AQ14524 2016 aa12.35□□□□□ -0.43
CTDSP2-206ENST00000550144 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 KPNA7A9QM74 516 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 PODXLO00592 558 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 LCA5LO95447 670 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 PFKMP08237 780 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 CSF2RAP15509 400 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 CYP11B1P15538 503 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 TNFAIP3P21580 790 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 ITGB8P26012 769 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 RAP1GAPP47736 663 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 GFPT1Q06210 699 aaPredicted RBP12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 TUSC3Q13454 348 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 BMS1Q14692 1282 aaKnown RBP12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
CTDSP2-206ENST00000550144 SLC47A2Q86VL8 602 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms