RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ZSWIM2Q8NEG5 633 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 SLC7A14Q8TBB6 771 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 SCFD1Q8WVM8 642 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 PRKD2Q9BZL6 878 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 GOLPH3LQ9H4A5 285 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 SLC39A2Q9NP94 309 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 AGPAT3Q9NRZ7 376 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 DPP3Q9NY33 737 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 HSPBP1Q9NZL4 362 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 FBXL5Q9UKA1 691 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 TULP1O00294 542 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 KLRC4O43908 158 aa18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 TBC1D4O60343 1298 aa18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 LILRA4P59901 499 aa18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 SNRPFP62306 86 aaKnown RBP18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 TFAMQ00059 246 aaKnown RBP18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 RTL10Q7L3V2 364 aa18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 OTOP3Q7RTS5 596 aa18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 USP37Q86T82 979 aa18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 ACSF2Q96CM8 615 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 ZNF560Q96MR9 790 aa18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 OXCT2Q9BYC2 517 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 KIAA1586Q9HCI6 787 aa18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 WDR6Q9NNW5 1121 aaKnown RBP18.64■□□□□ 0.57
CHMP1A-208ENST00000550102 WDR27A2RRH5 827 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 PIRO00625 290 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 XYLBO75191 536 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 TYMPP19971 482 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 ARPP19P56211 112 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 WNT7BP56706 349 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 PSMD2Q13200 908 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 KMT5BQ4FZB7 885 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 ZDHHC14Q8IZN3 488 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 ZNF461Q8TAF7 563 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 CACTINQ8WUQ7 758 aaKnown RBP18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 CCDC47Q96A33 483 aaKnown RBP18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 CCDC34Q96HJ3 373 aa18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 CGNQ9P2M7 1197 aaKnown RBP18.63■□□□□ 0.57
CHMP1A-208ENST00000550102 TECTAO75443 2155 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 GOLGA6L4A6NEF3 574 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 ZNF233A6NK53 670 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 PRRG1O14668 218 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 TGFB1I1O43294 461 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 OAZ2O95190 189 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 RPN1P04843 607 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 POU2F2P09086 479 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 CPB1P15086 417 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 TAF6P49848 677 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 CYP2J2P51589 502 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 PTPN21Q16825 1174 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 KNOP1Q1ED39 458 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 UVSSAQ2YD98 709 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 SV2CQ496J9 727 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 TMEM31Q5JXX7 168 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 TPGS2Q68CL5 300 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 OVOS1Q6IE37 1185 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 KRBA2Q6ZNG9 492 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 CBWD2Q8IUF1 395 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 PLCD3Q8N3E9 789 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 KIAA0895Q8NCT3 520 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 GOLGA5Q8TBA6 731 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 SENP8Q96LD8 212 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 PDE11AQ9HCR9 933 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 ITGA11Q9UKX5 1188 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 TIMM13Q9Y5L4 95 aaPredicted RBP18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 NOTCH4Q99466 2003 aa18.62■□□□□ 0.57
CHMP1A-208ENST00000550102 FAM86C2PA6NEL3 165 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 OR6C75A6NL08 312 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 SPTLC1O15269 473 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 ABLIM3O94929 683 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 ZNF202O95125 648 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 ITGB3P05106 788 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 TMEM191BP0C7N4 346 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 PRR29P0C7W0 189 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 ATF2P15336 505 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 ELF1P32519 619 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 PNPLA4P41247 253 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 SURF1Q15526 300 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 SNRNP35Q16560 246 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 C12orf56Q8IXR9 622 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 MTMR12Q9C0I1 747 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 DSEQ9UL01 958 aa18.61■□□□□ 0.57
CHMP1A-208ENST00000550102 CCL16O15467 120 aa18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 GPR37L1O60883 481 aa18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 POLR2BP30876 1174 aaKnown RBP18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 STK4Q13043 487 aa18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 TCEAL8Q8IYN2 117 aa18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 C1orf127Q8N9H9 656 aa18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 XXYLT1Q8NBI6 393 aa18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 ANKRD36BP1Q96IX9 119 aa18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 C11orf16Q9NQ32 467 aa18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 AFF4Q9UHB7 1163 aaKnown RBP18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 CIZ1Q9ULV3 898 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 MAFFQ9ULX9 164 aa18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 POLIQ9UNA4 740 aa18.6■□□□□ 0.57
CHMP1A-208ENST00000550102 PTPRJQ12913 1337 aa18.59■□□□□ 0.57
CHMP1A-208ENST00000550102 CLIC2O15247 247 aa18.59■□□□□ 0.57
CHMP1A-208ENST00000550102 TNNC2P02585 160 aa18.59■□□□□ 0.57
CHMP1A-208ENST00000550102 LRG1P02750 347 aa18.59■□□□□ 0.57
CHMP1A-208ENST00000550102 CYP11A1P05108 521 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms