RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 SFR1Q86XK3 245 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 NT5DC4Q86YG4 428 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 ELMOD1Q8N336 334 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 LINC00301Q8NCQ3 95 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 C3orf58Q8NDZ4 430 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 SLC7A14Q8TBB6 771 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 KCNG4Q8TDN1 519 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 LRRC15Q8TF66 581 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 ACCSQ96QU6 501 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 PYM1Q9BRP8 204 aaKnown RBP11.33□□□□□ -0.6
CCDC38-207ENST00000549752 TNMDQ9H2S6 317 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 MFSD1Q9H3U5 465 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 MAGEF1Q9HAY2 307 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 KCNK12Q9HB15 430 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 AGO2Q9UKV8 859 aaKnown RBP11.33□□□□□ -0.6
CCDC38-207ENST00000549752 CFAP45Q9UL16 551 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 KCNH3Q9ULD8 1083 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 POLIQ9UNA4 740 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 DUSP12Q9UNI6 340 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 PIEZO1Q92508 2521 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 MYMKA6NI61 221 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 LACTBL1A8MY62 500 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 I3L4J1 428 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 IL18RAPO95256 599 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 GCNT3O95395 438 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 ZSCAN22P10073 491 aaPredicted RBP11.32□□□□□ -0.6
CCDC38-207ENST00000549752 LAMP2P13473 410 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 IDEP14735 1019 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 ATF2P15336 505 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 TNFSF9P41273 254 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 PTPN5P54829 565 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 YWHAHQ04917 246 aaPredicted RBP11.32□□□□□ -0.6
CCDC38-207ENST00000549752 TMEM132DQ14C87 1099 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 ZBTB6Q15916 424 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 ENOX2Q16206 610 aaKnown RBP11.32□□□□□ -0.6
CCDC38-207ENST00000549752 CD300LGQ6UXG3 332 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 DSTYKQ6XUX3 929 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 MTSS1LQ765P7 747 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 SYCP3Q8IZU3 236 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 IQUBQ8NA54 791 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 POMGNT1Q8WZA1 660 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 FIZ1Q96SL8 496 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 PHOX2BQ99453 314 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 HAPLN2Q9GZV7 340 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 TMEM206Q9H813 350 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 TUBGCP4Q9UGJ1 667 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 CPSF3Q9UKF6 684 aaKnown RBP11.32□□□□□ -0.6
CCDC38-207ENST00000549752 FBXL21Q9UKT6 434 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 C2CD2Q9Y426 696 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 STYXL1Q9Y6J8 313 aa11.32□□□□□ -0.6
CCDC38-207ENST00000549752 NUP210Q8TEM1 1887 aaPredicted RBP11.32□□□□□ -0.6
CCDC38-207ENST00000549752 MYH10P35580 1976 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 OR6C75A6NL08 312 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 M0QZQ0 153 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 ZNF197O14709 1029 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 KIAA0391O15091 583 aaKnown RBP11.31□□□□□ -0.6
CCDC38-207ENST00000549752 CCL16O15467 120 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 ADAM12O43184 909 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 FAM189A1O60320 539 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 ABLIM3O94929 683 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 SRFP11831 508 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 ODC1P11926 461 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 CPB1P15086 417 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 ROR1Q01973 937 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 MRPL58Q14197 206 aaKnown RBP11.31□□□□□ -0.6
CCDC38-207ENST00000549752 PABPC1LQ4VXU2 614 aaKnown RBP11.31□□□□□ -0.6
CCDC38-207ENST00000549752 ZC2HC1CQ53FD0 456 aaPredicted RBP11.31□□□□□ -0.6
CCDC38-207ENST00000549752 L1TD1Q5T7N2 865 aaKnown RBP11.31□□□□□ -0.6
CCDC38-207ENST00000549752 SPATA1Q5VX52 437 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 IQCEQ6IPM2 695 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 GRASPQ7Z6J2 395 aaPredicted RBP11.31□□□□□ -0.6
CCDC38-207ENST00000549752 PDILTQ8N807 584 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 DNAJC19Q96DA6 116 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 MYADMQ96S97 322 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 PANK4Q9NVE7 773 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 FAM13BQ9NYF5 915 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 AFF4Q9UHB7 1163 aaKnown RBP11.31□□□□□ -0.6
CCDC38-207ENST00000549752 FBXL5Q9UKA1 691 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 DSEQ9UL01 958 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 CDH7Q9ULB5 785 aa11.31□□□□□ -0.6
CCDC38-207ENST00000549752 FRMD3A2A2Y4 597 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 WDR27A2RRH5 827 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 TBC1D4O60343 1298 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 OAZ2O95190 189 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 F13A1P00488 732 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 PTPN2P17706 415 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 TYMPP19971 482 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 GARTP22102 1010 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 RFX1P22670 979 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 AVPR2P30518 371 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 ME1P48163 572 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 AARSP49588 968 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC38-207ENST00000549752 ACOT2P49753 483 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 CLCN5P51795 746 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 ARPP19P56211 112 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 PRSS12P56730 875 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 SPAG1Q07617 926 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 PLD1Q13393 1074 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 JADE1Q6IE81 842 aa11.3□□□□□ -0.6
CCDC38-207ENST00000549752 ARMCX5Q6P1M9 558 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms