RNA–Protein interactions for RNA: ENST00000549688.1

CALCOCO1-215, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-215ENST00000549688 CUL2Q13617 745 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 RAPGEF1Q13905 1077 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 BTG3Q14201 252 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 BMS1Q14692 1282 aaKnown RBP7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 ARID5BQ14865 1188 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 NAB2Q15742 525 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 TMEM240Q5SV17 173 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 SFMBT2Q5VUG0 894 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 PPP1R2P3Q6NXS1 205 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 UNC93AQ86WB7 457 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 TXLNBQ8N3L3 684 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 C18orf25Q96B23 403 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 ZNF689Q96CS4 500 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 CASD1Q96PB1 797 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 DNAJC7Q99615 494 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 RAD9AQ99638 391 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 TTYH3Q9C0H2 523 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 XYLT2Q9H1B5 865 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 SIX4Q9UIU6 781 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 DNAJC12Q9UKB3 198 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 KIAA1257Q9ULG3 409 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 ZMYND8Q9ULU4 1186 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 PLAGL2Q9UPG8 496 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 PCDHB12Q9Y5F1 795 aa7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 SF3B1O75533 1304 aaKnown RBP eCLIP7.66□□□□□ -1.18
CALCOCO1-215ENST00000549688 CASTOR2A6NHX0 329 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 MEIS3P2A8K0S8 358 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 F8VZ95 297 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SYN3O14994 580 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 MED7O43513 233 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 TACC1O75410 805 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 GFPT2O94808 682 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 CST3P01034 146 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 PAEPP09466 180 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 TYMPP19971 482 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 HNRNPH3P31942 346 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SOX5P35711 763 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 ASPAP45381 313 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 LHX1P48742 406 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 AARSP49588 968 aaKnown RBP eCLIP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 RGS19P49795 217 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 PDE6CP51160 858 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 CLCNKBP51801 687 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 WNT7BP56706 349 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 JAM2P57087 298 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 HTRA4P83105 476 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 CDK17Q00537 523 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 CREMQ03060 361 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 PTK2Q05397 1052 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SOX4Q06945 474 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 INCA1Q0VD86 236 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 STILQ15468 1287 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 ASIC2Q16515 512 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 HS1BP3Q53T59 392 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SPOUT1Q5T280 376 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 RASIP1Q5U651 963 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 IQCEQ6IPM2 695 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 PHLDB3Q6NSJ2 640 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 DSTYKQ6XUX3 929 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 C16orf59Q7L2K0 433 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 RRAGAQ7L523 313 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 ZNF677Q86XU0 584 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 HERC6Q8IVU3 1022 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 COLGALT2Q8IYK4 626 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 FIBCD1Q8N539 461 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SPC24Q8NBT2 197 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 CXorf38Q8TB03 319 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 CPLX3Q8WVH0 158 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SHC3Q92529 594 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SEMA4DQ92854 862 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 VWCEQ96DN2 955 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 TRIM44Q96DX7 344 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 TNIP3Q96KP6 325 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 RNPC3Q96LT9 517 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 ZNF558Q96NG5 402 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SAMD11Q96NU1 681 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 MMS19Q96T76 1030 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 BCO2Q9BYV7 579 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 UBE2OQ9C0C9 1292 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 GANQ9H2C0 597 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 RC3H2Q9HBD1 1191 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SIX2Q9NPC8 291 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 LUC7LQ9NQ29 371 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 ABHD10Q9NUJ1 306 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 RNF19AQ9NV58 838 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 AIPL1Q9NZN9 384 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 NXF1Q9UBU9 619 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 ADAM28Q9UKQ2 775 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SSX2IPQ9Y2D8 614 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 FAN1Q9Y2M0 1017 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SNX9Q9Y5X1 595 aa7.65□□□□□ -1.18
CALCOCO1-215ENST00000549688 SCN1AP35498 2009 aa7.64□□□□□ -1.19
CALCOCO1-215ENST00000549688 LRRC53A6NM62 1247 aa7.64□□□□□ -1.19
CALCOCO1-215ENST00000549688 M0QZQ0 153 aa7.64□□□□□ -1.19
CALCOCO1-215ENST00000549688 CYB561D2O14569 222 aa7.64□□□□□ -1.19
CALCOCO1-215ENST00000549688 TLL1O43897 1013 aa7.64□□□□□ -1.19
CALCOCO1-215ENST00000549688 TADA2AO75478 443 aa7.64□□□□□ -1.19
CALCOCO1-215ENST00000549688 NOL4O94818 638 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms