RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 MXI1P50539 228 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 GPR162Q16538 588 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 RASGEF1CQ8N431 466 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 BSNDQ8WZ55 320 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 SLC10A4Q96EP9 437 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 MS4A4AQ96JQ5 239 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 PCYT2Q99447 389 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 FAM213AQ9BRX8 229 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 STK33Q9BYT3 514 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC00661-204ENST00000549354 APEX2Q9UBZ4 518 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 EXOC7Q9UPT5 735 aa11.8□□□□□ -0.52
LINC00661-204ENST00000549354 P4HA2O15460 535 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 CSDE1O75534 798 aaKnown RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 ZSCAN5DPP0CG00 497 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 ANXA13P27216 316 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 BFSP1Q12934 665 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 TARBP2Q15633 366 aaKnown RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 PREPLQ4J6C6 727 aaPredicted RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 SEL1L2Q5TEA6 688 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 SCARA5Q6ZMJ2 495 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 TAS1R2Q8TE23 839 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 ZNF526Q8TF50 670 aaPredicted RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 MPHOSPH6Q99547 160 aaKnown RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 PAGR1Q9BTK6 254 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 DHX33Q9H6R0 707 aaKnown RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 ZNF302Q9NR11 478 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 CHST7Q9NS84 486 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 RNF19AQ9NV58 838 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 SIP14410 1827 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 ATP8B3O60423 1300 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 H0Y3Z8 333 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 HNRNPDLO14979 420 aaKnown RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 ATP6V1G2O95670 118 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 OATP04181 439 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 CFHP08603 1231 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 CALCOCO2Q13137 446 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 DMP1Q13316 513 aaPredicted RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 SGO2Q562F6 1265 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 METTL7BQ6UX53 244 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 INTS8Q75QN2 995 aaKnown RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 TRPM8Q7Z2W7 1104 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 PPP1R13LQ8WUF5 828 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 NSMCE1Q8WV22 266 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 ARHGEF2Q92974 986 aaKnown RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 FBXL18Q96ME1 805 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 ZNF317Q96PQ6 595 aaPredicted RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 AGPAT1Q99943 283 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 ATP6V0A4Q9HBG4 840 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 GRHL1Q9NZI5 618 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 ARHGAP28Q9P2N2 729 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 MTRF1LQ9UGC7 380 aaKnown RBP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 RASAL2Q9UJF2 1139 aa11.79□□□□□ -0.52
LINC00661-204ENST00000549354 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00661-204ENST00000549354 TMEM253P0C7T8 217 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 ETS1P14921 441 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 CHKAP35790 457 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 PEX19P40855 299 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 TMEM132AQ24JP5 1023 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 EMC10Q5UCC4 262 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 NOP9Q86U38 636 aaKnown RBP11.78□□□□□ -0.52
LINC00661-204ENST00000549354 LMO3Q8TAP4 145 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 ATXN2LQ8WWM7 1075 aaKnown RBP11.78□□□□□ -0.52
LINC00661-204ENST00000549354 MCM8Q9UJA3 840 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 TMEM120BA0PK00 339 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 H0YCG3 227 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 LGR5O75473 907 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 NEFHP12036 1026 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 ADSSP30520 456 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 VAMP7P51809 220 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 NRLP54845 237 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 C1orf220Q5T0J3 134 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 WDR78Q5VTH9 848 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 XXYLT1Q8NBI6 393 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 ZNF564Q8TBZ8 553 aaPredicted RBP11.78□□□□□ -0.52
LINC00661-204ENST00000549354 PLEKHO2Q8TD55 490 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 SEMA4DQ92854 862 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 TLCD1Q96CP7 247 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 MMP19Q99542 508 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 FAM167BQ9BTA0 163 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 GPR88Q9GZN0 384 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 KIF9Q9HAQ2 790 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 HSPBP1Q9NZL4 362 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 NENFQ9UMX5 172 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 TRPC6Q9Y210 931 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 MYH9P35579 1960 aaKnown RBP11.78□□□□□ -0.52
LINC00661-204ENST00000549354 IGF2BP3O00425 579 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC00661-204ENST00000549354 RARAP10276 462 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 ARL2P36404 184 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 CCDC62Q6P9F0 684 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 ZNF449Q6P9G9 518 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 C4orf33Q8N1A6 199 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 UBL4BQ8N7F7 174 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 ZBTB10Q96DT7 871 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 TMEM117Q9H0C3 514 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 CARD9Q9H257 536 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 KMT5AQ9NQR1 393 aa11.78□□□□□ -0.52
LINC00661-204ENST00000549354 ANKRD62A6NC57 917 aa11.77□□□□□ -0.52
LINC00661-204ENST00000549354 DIAPH2O60879 1101 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms