RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 RNF220Q5VTB9 566 aa6.49□□□□□ -1.37
USP15-213ENST00000549268 RHOUQ7L0Q8 258 aa6.49□□□□□ -1.37
USP15-213ENST00000549268 MAEAQ7L5Y9 396 aa6.49□□□□□ -1.37
USP15-213ENST00000549268 CHST15Q7LFX5 561 aaPredicted RBP6.49□□□□□ -1.37
USP15-213ENST00000549268 PPP1R3BQ86XI6 285 aa6.49□□□□□ -1.37
USP15-213ENST00000549268 PCSK9Q8NBP7 692 aaKnown RBP6.49□□□□□ -1.37
USP15-213ENST00000549268 SLC25A43Q8WUT9 341 aaPredicted RBP6.49□□□□□ -1.37
USP15-213ENST00000549268 NT5C1BQ96P26 610 aa6.49□□□□□ -1.37
USP15-213ENST00000549268 MRPL46Q9H2W6 279 aaKnown RBP6.49□□□□□ -1.37
USP15-213ENST00000549268 MMRN2Q9H8L6 949 aa6.49□□□□□ -1.37
USP15-213ENST00000549268 TRPM5Q9NZQ8 1165 aa6.49□□□□□ -1.37
USP15-213ENST00000549268 JKAMPQ9P055 326 aa6.49□□□□□ -1.37
USP15-213ENST00000549268 CFAP97Q9P2B7 532 aa6.49□□□□□ -1.37
USP15-213ENST00000549268 ATP11BQ9Y2G3 1177 aa6.49□□□□□ -1.37
USP15-213ENST00000549268 USP15Q9Y4E8 981 aaPredicted RBP6.49□□□□□ -1.37
USP15-213ENST00000549268 A6NNZ2 444 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 SLC43A1O75387 559 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 ZBED1O96006 694 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 GNAI2P04899 355 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 MYL1P05976 194 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 GJB1P08034 283 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 ADH4P08319 380 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 NBPF7P0C2Y1 421 aaPredicted RBP6.48□□□□□ -1.37
USP15-213ENST00000549268 KITP10721 976 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 AGFG1P52594 562 aaKnown RBP6.48□□□□□ -1.37
USP15-213ENST00000549268 USP14P54578 494 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 RNASE9P60153 205 aaKnown RBP6.48□□□□□ -1.37
USP15-213ENST00000549268 PURAQ00577 322 aaKnown RBP6.48□□□□□ -1.37
USP15-213ENST00000549268 CCDC146Q8IYE0 955 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 ULK2Q8IYT8 1036 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 ZNF276Q8N554 614 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 SLC17A8Q8NDX2 589 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 CPT1CQ8TCG5 803 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 HAS1Q92839 578 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 DCLRE1CQ96SD1 692 aaKnown RBP6.48□□□□□ -1.37
USP15-213ENST00000549268 MRIQ9BWK5 157 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 IMPG2Q9BZV3 1241 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 SLC2A4RGQ9NR83 387 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 TPCN1Q9ULQ1 816 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 SLC45A2Q9UMX9 530 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 L1RE1Q9UN81 338 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 FZD1Q9UP38 647 aa6.48□□□□□ -1.37
USP15-213ENST00000549268 ZNF785A8K8V0 405 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 DIRC3C9JPN6 131 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 PLIN1O60240 522 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 MGEA5O60502 916 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 CKBP12277 381 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 RHCEP18577 417 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 SLC6A4P31645 630 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 HMGA2P52926 109 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 FAM193AP78312 1265 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 RHDQ02161 417 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 EXOSC9Q06265 439 aaKnown RBP6.47□□□□□ -1.37
USP15-213ENST00000549268 DPTQ07507 201 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 FHL2Q14192 279 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 FOXR2Q6PJQ5 311 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 ZNF365Q70YC5 407 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 FAM90A1Q86YD7 464 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 SYT12Q8IV01 421 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 KIAA0319LQ8IZA0 1049 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 PRRX2Q99811 253 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 SLC46A2Q9BY10 475 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 ZMAT3Q9HA38 289 aaKnown RBP6.47□□□□□ -1.37
USP15-213ENST00000549268 RSAD1Q9HA92 442 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 PIH1D1Q9NWS0 290 aaKnown RBP6.47□□□□□ -1.37
USP15-213ENST00000549268 FAM30AQ9NZY2 134 aa6.47□□□□□ -1.37
USP15-213ENST00000549268 GOLIM4O00461 696 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 PHGDHO43175 533 aaKnown RBP6.46□□□□□ -1.38
USP15-213ENST00000549268 FAM20BO75063 409 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 SPATA31D3P0C874 917 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 HDCP19113 662 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 SLC7A1P30825 629 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 SOX8P57073 446 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 SAFBQ15424 915 aaKnown RBP eCLIP6.46□□□□□ -1.38
USP15-213ENST00000549268 SPATA31D4Q6ZUB0 917 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 COL23A1Q86Y22 540 aaPredicted RBP6.46□□□□□ -1.38
USP15-213ENST00000549268 LRTOMTQ8WZ04 291 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 MARS2Q96GW9 593 aaKnown RBP6.46□□□□□ -1.38
USP15-213ENST00000549268 SARGQ9BW04 601 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.46□□□□□ -1.38
USP15-213ENST00000549268 ING1Q9UK53 422 aaPredicted RBP6.46□□□□□ -1.38
USP15-213ENST00000549268 ZDHHC8Q9ULC8 765 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 REXO2Q9Y3B8 237 aaKnown RBP6.46□□□□□ -1.38
USP15-213ENST00000549268 PCDHGB6Q9Y5F9 930 aa6.46□□□□□ -1.38
USP15-213ENST00000549268 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.46□□□□□ -1.38
USP15-213ENST00000549268 AHRRA9YTQ3 701 aa6.45□□□□□ -1.38
USP15-213ENST00000549268 PQBP1O60828 265 aaKnown RBP6.45□□□□□ -1.38
USP15-213ENST00000549268 ERN1O75460 977 aaKnown RBP6.45□□□□□ -1.38
USP15-213ENST00000549268 RPS6KA4O75676 772 aa6.45□□□□□ -1.38
USP15-213ENST00000549268 PRSS23O95084 383 aa6.45□□□□□ -1.38
USP15-213ENST00000549268 MAP4K4O95819 1239 aaPredicted RBP6.45□□□□□ -1.38
USP15-213ENST00000549268 ANXA1P04083 346 aa6.45□□□□□ -1.38
USP15-213ENST00000549268 NR4A1P22736 598 aa6.45□□□□□ -1.38
USP15-213ENST00000549268 TGFB2P61812 414 aa6.45□□□□□ -1.38
USP15-213ENST00000549268 NOMO2Q5JPE7 1267 aa6.45□□□□□ -1.38
USP15-213ENST00000549268 CCSAPQ6IQ19 270 aaPredicted RBP6.45□□□□□ -1.38
USP15-213ENST00000549268 GDF7Q7Z4P5 450 aa6.45□□□□□ -1.38
USP15-213ENST00000549268 MRGPREQ86SM8 312 aa6.45□□□□□ -1.38
USP15-213ENST00000549268 NUP133Q8WUM0 1156 aa6.45□□□□□ -1.38
USP15-213ENST00000549268 LARP4BQ92615 738 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms