RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 AVENQ9NQS1 362 aaPredicted RBP12.35□□□□□ -0.43
BEST3-209ENST00000548658 AFF4Q9UHB7 1163 aaKnown RBP12.35□□□□□ -0.43
BEST3-209ENST00000548658 ZNF318Q5VUA4 2279 aa12.35□□□□□ -0.43
BEST3-209ENST00000548658 OR6C75A6NL08 312 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 ZNF197O14709 1029 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 KIAA0391O15091 583 aaKnown RBP12.34□□□□□ -0.43
BEST3-209ENST00000548658 F13A1P00488 732 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 ODC1P11926 461 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 CPB1P15086 417 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 GARTP22102 1010 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 LILRA4P59901 499 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 ZBTB41Q5SVQ8 909 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 ASTLQ6HA08 431 aaPredicted RBP12.34□□□□□ -0.43
BEST3-209ENST00000548658 IQCEQ6IPM2 695 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 LEMD2Q8NC56 503 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 MAGEF1Q9HAY2 307 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 KBTBD4Q9NVX7 518 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 FAM13BQ9NYF5 915 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 GDE1Q9NZC3 331 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 TBC1D7Q9P0N9 293 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 DNMT3BQ9UBC3 853 aaKnown RBP12.34□□□□□ -0.43
BEST3-209ENST00000548658 DSEQ9UL01 958 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 MRPS23Q9Y3D9 190 aaKnown RBP12.34□□□□□ -0.43
BEST3-209ENST00000548658 GTF3C3Q9Y5Q9 886 aa12.34□□□□□ -0.43
BEST3-209ENST00000548658 PDCD11Q14690 1871 aaKnown RBP12.34□□□□□ -0.43
BEST3-209ENST00000548658 MUC6Q6W4X9 2439 aa12.33□□□□□ -0.43
BEST3-209ENST00000548658 ZDBF2Q9HCK1 2354 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 A0A087X0B3 334 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 ANO9A1A5B4 782 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 PIRO00625 290 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 MICAL2O94851 1124 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 NFICP08651 508 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 ADSSP30520 456 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 ADCY1Q08828 1119 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 GPR17Q13304 367 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 PLD1Q13393 1074 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 HTR4Q13639 388 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 MYBPC2Q14324 1141 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 IER5LQ5T953 404 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 CYP4A22Q5TCH4 519 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 C9orf57Q5W0N0 161 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 OVOS1Q6IE37 1185 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 ARMCX5Q6P1M9 558 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 CACTINQ8WUQ7 758 aaKnown RBP12.33□□□□□ -0.44
BEST3-209ENST00000548658 RSAD2Q8WXG1 361 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 SENP8Q96LD8 212 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 ZNF512Q96ME7 567 aaPredicted RBP12.33□□□□□ -0.44
BEST3-209ENST00000548658 RTP3Q9BQQ7 232 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 SMOC2Q9H3U7 446 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 DPP3Q9NY33 737 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 INSL5Q9Y5Q6 135 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 NUMBLQ9Y6R0 609 aa12.33□□□□□ -0.44
BEST3-209ENST00000548658 TISP43B9A030 160 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 PDGFBP01127 241 aaPredicted RBP12.32□□□□□ -0.44
BEST3-209ENST00000548658 RHOP08100 348 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 PNPLA4P41247 253 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 ME1P48163 572 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 VCPP55072 806 aaKnown RBP12.32□□□□□ -0.44
BEST3-209ENST00000548658 NTHL1P78549 312 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 NHLH1Q02575 133 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 KCNA1Q09470 495 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 E2F4Q16254 413 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 CNNM4Q6P4Q7 775 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 CRELD2Q6UXH1 353 aaPredicted RBP12.32□□□□□ -0.44
BEST3-209ENST00000548658 METTL23Q86XA0 190 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 SIX5Q8N196 739 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 THEM5Q8N1Q8 247 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 DHX58Q96C10 678 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 SHDQ96IW2 340 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 FAM213AQ9BRX8 229 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 TRIM9Q9C026 710 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 SLC2A4RGQ9NR83 387 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 HCFC1R1Q9NWW0 138 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 HSFX1Q9UBD0 423 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 TIMM13Q9Y5L4 95 aaPredicted RBP12.32□□□□□ -0.44
BEST3-209ENST00000548658 DOCK8Q8NF50 2099 aa12.32□□□□□ -0.44
BEST3-209ENST00000548658 STK25O00506 426 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 EXTL3O43909 919 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 SEC24AO95486 1093 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 CYP11A1P05108 521 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 CFHP08603 1231 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 RFX1P22670 979 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 TAF6P49848 677 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 SNRPFP62306 86 aaKnown RBP12.31□□□□□ -0.44
BEST3-209ENST00000548658 PFKPQ01813 784 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 SMARCB1Q12824 385 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 SURF1Q15526 300 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 SV2CQ496J9 727 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 FOXD4L5Q5VV16 416 aaPredicted RBP12.31□□□□□ -0.44
BEST3-209ENST00000548658 SHC4Q6S5L8 630 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 RNF19BQ6ZMZ0 732 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 PDZD4Q76G19 769 aaPredicted RBP12.31□□□□□ -0.44
BEST3-209ENST00000548658 NPAS3Q8IXF0 933 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 FLCNQ8NFG4 579 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 ITFG1Q8TB96 612 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 FOXD4L4Q8WXT5 416 aaPredicted RBP12.31□□□□□ -0.44
BEST3-209ENST00000548658 ZNF560Q96MR9 790 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 C7orf25Q9BPX7 421 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 CORO1BQ9BR76 489 aa12.31□□□□□ -0.44
BEST3-209ENST00000548658 GPR88Q9GZN0 384 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms