RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 MAMDC4Q6UXC1 1216 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 Q6ZSN1 163 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 POLNQ7Z5Q5 900 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 SRLQ86TD4 932 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 SYT12Q8IV01 421 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 SMC5Q8IY18 1101 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 ELOA2Q8IYF1 753 aaPredicted RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 FAM186BQ8IYM0 893 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 RNF152Q8N8N0 203 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 GIMAP8Q8ND71 665 aaPredicted RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 OR10H5Q8NGA6 315 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 TFAP2CQ92754 450 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 TNPO1Q92973 898 aaKnown RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 TNIP3Q96KP6 325 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 TEPSINQ96N21 525 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 P2RX7Q99572 595 aaKnown RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 CPPED1Q9BRF8 314 aaPredicted RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 EPC1Q9H2F5 836 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 GSTO2Q9H4Y5 243 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 BRD9Q9H8M2 597 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 PARD6AQ9NPB6 346 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.06□□□□□ -1.6
PTCH1-216ENST00000548379 COL20A1Q9P218 1284 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 CPNE7Q9UBL6 633 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 SLC45A2Q9UMX9 530 aa5.06□□□□□ -1.6
PTCH1-216ENST00000548379 DNMBPQ6XZF7 1577 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 DRGXA6NNA5 263 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 PRR5-ARHGAP8B1AHC4 643 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 MFAP3LO75121 409 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 EIF3JO75822 258 aaKnown RBP5.05□□□□□ -1.6
PTCH1-216ENST00000548379 THP07101 528 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 GNAI3P08754 354 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 TSHRP16473 764 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 GNAI1P63096 354 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 HTRA4P83105 476 aaPredicted RBP5.05□□□□□ -1.6
PTCH1-216ENST00000548379 UTP14CQ5TAP6 766 aaKnown RBP5.05□□□□□ -1.6
PTCH1-216ENST00000548379 EFCAB12Q6NXP0 572 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 CIR1Q86X95 450 aaPredicted RBP5.05□□□□□ -1.6
PTCH1-216ENST00000548379 D2HGDHQ8N465 521 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 RNF169Q8NCN4 708 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 DEPTORQ8TB45 409 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 MORC4Q8TE76 937 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 SCAMP4Q969E2 229 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 MIEF2Q96C03 454 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 CCDC138Q96M89 665 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 RIPOR3Q96MK2 946 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 COLEC11Q9BWP8 271 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 ZNF287Q9HBT7 754 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 PADI4Q9UM07 663 aa5.05□□□□□ -1.6
PTCH1-216ENST00000548379 ZNF536O15090 1300 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 ABHD14A-ACY1A0A1B0GW23 586 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 KLRG2A4D1S0 409 aaPredicted RBP5.04□□□□□ -1.6
PTCH1-216ENST00000548379 TRIM43BA6NCK2 446 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 E9PLN8 166 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 F8W8V4 182 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 KPNA5O15131 536 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 PRSS23O95084 383 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 BRAFP15056 766 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 GCSHP23434 173 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 SLC6A2P23975 617 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 MGAT1P26572 445 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 NOMO3P69849 1222 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 SLFN5Q08AF3 891 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 DAG1Q14118 895 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 XRRA1Q6P2D8 792 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 LIMS2Q7Z4I7 341 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 MICU3Q86XE3 530 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 ANKRD35Q8N283 1001 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 OR2C3Q8N628 320 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 FITM2Q8N6M3 262 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 TMIEQ8NEW7 156 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 OR6B3Q8NGW1 331 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 DDX17Q92841 729 aaKnown RBP5.04□□□□□ -1.6
PTCH1-216ENST00000548379 TRIM43Q96BQ3 446 aaPredicted RBP5.04□□□□□ -1.6
PTCH1-216ENST00000548379 KLHL32Q96NJ5 620 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 VKORC1Q9BQB6 163 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 CHMP4AQ9BY43 222 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 STARD7Q9NQZ5 370 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 AFF4Q9UHB7 1163 aaKnown RBP5.04□□□□□ -1.6
PTCH1-216ENST00000548379 OGDHLQ9ULD0 1010 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 AGAP1Q9UPQ3 857 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 CORO2BQ9UQ03 480 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 HDAC5Q9UQL6 1122 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 JAG2Q9Y219 1238 aa5.04□□□□□ -1.6
PTCH1-216ENST00000548379 POLA1P09884 1462 aaPredicted RBP5.04□□□□□ -1.6
PTCH1-216ENST00000548379 EIF4G3O43432 1585 aaKnown RBP5.04□□□□□ -1.6
PTCH1-216ENST00000548379 ARID4BQ4LE39 1312 aaPredicted RBP5.03□□□□□ -1.6
PTCH1-216ENST00000548379 SNAPC4Q5SXM2 1469 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 RAD54L2Q9Y4B4 1467 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 A0A087WWL8 130 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 CDHR4A6H8M9 788 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 IFRD1O00458 451 aaPredicted RBP5.03□□□□□ -1.6
PTCH1-216ENST00000548379 BTN3A1O00481 513 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 AGFG2O95081 481 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 IL18RAPO95256 599 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 CHEK2O96017 543 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 FDXRP22570 491 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 TNFSF4P23510 183 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 PHKA1P46020 1223 aa5.03□□□□□ -1.6
PTCH1-216ENST00000548379 HABP2Q14520 560 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms