RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 OSBPL2Q9H1P3 480 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 KLK15Q9H2R5 256 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 KLHL11Q9NVR0 708 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 SLC52A1Q9NWF4 448 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 OXSMQ9NWU1 459 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 GPRC5DQ9NZD1 345 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 KCNE5Q9UJ90 142 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 PTCH2Q9Y6C5 1203 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 NRXN3Q9Y4C0 1643 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 NEXMIFQ5QGS0 1516 aa3.39□□□□□ -1.87
DEPDC4-204ENST00000547823 RGPD3A6NKT7 1758 aaPredicted RBP3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 RGPD4Q7Z3J3 1758 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 CGB1A6NKQ9 187 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 DRGXA6NNA5 263 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 ELL2O00472 640 aaPredicted RBP3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 PHF2O75151 1096 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 GPD1P21695 349 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 CHN2P52757 468 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 PPARAQ07869 468 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 FAM47AQ5JRC9 791 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 ANKS6Q68DC2 871 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 RNF169Q8NCN4 708 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 OR14C36Q8NHC7 312 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 SNX33Q8WV41 574 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 SARAFQ96BY9 339 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 RNF31Q96EP0 1072 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 AIFM2Q9BRQ8 373 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 MTFR1LQ9H019 292 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 IFT57Q9NWB7 429 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 KCTD5Q9NXV2 234 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 KCNG1Q9UIX4 513 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 MSRAQ9UJ68 235 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 ENTPD2Q9Y5L3 495 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 ADGRL2O95490 1459 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 PDE4DIPQ5VU43 2346 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 WDR90Q96KV7 1748 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 NPHP3Q7Z494 1330 aa3.38□□□□□ -1.87
DEPDC4-204ENST00000547823 A0A1B0GTW7 788 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 TOMM70O94826 608 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 BMP15O95972 392 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 POU3F3P20264 500 aaPredicted RBP3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 KRTAP10-6P60371 365 aaPredicted RBP3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 CXADRP78310 365 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 PHC1P78364 1004 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 OCRLQ01968 901 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 BMS1Q14692 1282 aaKnown RBP3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 CFAP100Q494V2 611 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 B3GNTL1Q67FW5 361 aaPredicted RBP3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 FOXR2Q6PJQ5 311 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 LILRB2Q8N423 598 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 LNX2Q8N448 690 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 SPATA3Q8NHX4 192 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 DRC1Q96MC2 740 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 NEU1Q99519 415 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 SALL3Q9BXA9 1300 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 SBF2Q86WG5 1849 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 KANK1Q14678 1352 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 MAP3K5Q99683 1374 aa3.37□□□□□ -1.87
DEPDC4-204ENST00000547823 CEP162Q5TB80 1403 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 ERBINQ96RT1 1412 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 MGST3O14880 152 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 PEX1O43933 1283 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 DNAJC8O75937 253 aaPredicted RBP3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 PRKCGP05129 697 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 CELA2AP08217 269 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 JMJD7P0C870 316 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 LSP1P33241 339 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 SLC10A2Q12908 348 aaPredicted RBP3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 SRSF7Q16629 238 aaKnown RBP eCLIP3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 RRP12Q5JTH9 1297 aaKnown RBP3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 ZBTB41Q5SVQ8 909 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 CDCA2Q69YH5 1023 aaPredicted RBP3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 PDPRQ8NCN5 879 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 SLC17A8Q8NDX2 589 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 MDM1Q8TC05 714 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 UBXN4Q92575 508 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 FLRT1Q9NZU1 646 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 FAM30AQ9NZY2 134 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 ZNF804BA4D1E1 1349 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 SPATA31A5Q5VU36 1347 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 SPATA31A3Q5VYP0 1347 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 SPATA31A7Q8IWB4 1347 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 METP08581 1390 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 ABCC5O15440 1437 aa3.36□□□□□ -1.87
DEPDC4-204ENST00000547823 COL14A1Q05707 1796 aaKnown RBP3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 WDR91A4D1P6 747 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 ERN1O75460 977 aaKnown RBP3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 GPANK1O95872 356 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 ELANEP08246 267 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 ATP2A2P16615 1042 aaKnown RBP3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 VAV2P52735 878 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 PROK1P58294 105 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 SP140Q13342 867 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 NFE2L2Q16236 605 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 PRAMEF14Q5SWL7 426 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 TSHZ3Q63HK5 1081 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 ZNF610Q8N9Z0 462 aa3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 PTCD3Q96EY7 689 aaKnown RBP3.35□□□□□ -1.87
DEPDC4-204ENST00000547823 FCRL4Q96PJ5 515 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms