RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 CUL2Q13617 745 aa18.13■□□□□ 0.49
ARFGAP1-220ENST00000547204 SHC3Q92529 594 aa18.13■□□□□ 0.49
ARFGAP1-220ENST00000547204 PPP1R10Q96QC0 940 aaKnown RBP18.13■□□□□ 0.49
ARFGAP1-220ENST00000547204 NIF3L1Q9GZT8 377 aa18.13■□□□□ 0.49
ARFGAP1-220ENST00000547204 SLC38A7Q9NVC3 462 aa18.13■□□□□ 0.49
ARFGAP1-220ENST00000547204 PYCARDQ9ULZ3 195 aa18.13■□□□□ 0.49
ARFGAP1-220ENST00000547204 SOWAHDA6NJG2 315 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 ENPP3O14638 875 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 FGBP02675 491 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 SERPING1P05155 500 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 DEFB128Q7Z7B8 93 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 ZSCAN30Q86W11 494 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 TMEM130Q8N3G9 435 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 GSTCDQ8NEC7 633 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 HERVK_113Q902F9 699 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 JAKMIP2Q96AA8 810 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 FAXDC2Q96IV6 333 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 CDX2Q99626 313 aaPredicted RBP18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 CHP1Q99653 195 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 MTIF3Q9H2K0 278 aaKnown RBP18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 ELAC1Q9H777 363 aaKnown RBP18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 VRTNQ9H8Y1 702 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 RNF19AQ9NV58 838 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 UNC80Q8N2C7 3258 aa18.12■□□□□ 0.49
ARFGAP1-220ENST00000547204 FOXN3O00409 490 aaPredicted RBP18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 INPPL1O15357 1258 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 GFPT2O94808 682 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 THP07101 528 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 CCDC172P0C7W6 258 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 PNMA6AP0CW24 399 aaPredicted RBP18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 PRKCIP41743 596 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 KCNJ6P48051 423 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 SCNN1GP51170 649 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 ARID5AQ03989 594 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 MYO1EQ12965 1108 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 TCTN1Q2MV58 587 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 ZNF667Q5HYK9 610 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 C9orf57Q5W0N0 161 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 HGSNATQ68CP4 663 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 IRF2BP2Q7Z5L9 587 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 GPIHBP1Q8IV16 184 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 RPUSD2Q8IZ73 545 aaKnown RBP18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 LRRC52Q8N7C0 313 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 HPDLQ96IR7 371 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 ARID3AQ99856 593 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 TMEM161AQ9NX61 479 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 ARHGAP20Q9P2F6 1191 aa18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 BZW2Q9Y6E2 419 aaKnown RBP18.11■□□□□ 0.49
ARFGAP1-220ENST00000547204 ANO9A1A5B4 782 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 GRXCR1A8MXD5 290 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 P4HA1P13674 534 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 LRPAP1P30533 357 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 ASPAP45381 313 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 SOX4Q06945 474 aaPredicted RBP18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 KLHL30Q0D2K2 578 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 GRIK3Q13003 919 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 TDRD12Q587J7 1177 aaKnown RBP18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 SMYD5Q6GMV2 418 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 CNKSR3Q6P9H4 555 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 GLB1LQ6UWU2 654 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 RAD9BQ6WBX8 426 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 OTOP2Q7RTS6 562 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 FAM71AQ8IYT1 594 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 CCDC170Q8IYT3 715 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 TIFAQ96CG3 184 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 ZNF560Q96MR9 790 aa18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 NHEJ1Q9H9Q4 299 aaPredicted RBP18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 CXXC1Q9P0U4 656 aaPredicted RBP18.1■□□□□ 0.49
ARFGAP1-220ENST00000547204 SSU72P8A0A1W2PR75 194 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 PIRO00625 290 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 OFD1O75665 1012 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 USP8P40818 1118 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 PNPLA4P41247 253 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 AFF1P51825 1210 aaKnown RBP18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 MAPK8IP2Q13387 824 aaPredicted RBP18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 MTF1Q14872 753 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 NAB2Q15742 525 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 WDR72Q3MJ13 1102 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 KIAA1524Q8TCG1 905 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 MYLIPQ8WY64 445 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 PBX4Q9BYU1 374 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 MIOSQ9NXC5 875 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 NXF1Q9UBU9 619 aaKnown RBP18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 POLIQ9UNA4 740 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 INPP5FQ9Y2H2 1132 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 CHD9Q3L8U1 2897 aa18.09■□□□□ 0.49
ARFGAP1-220ENST00000547204 TET1Q8NFU7 2136 aa18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 PPEF2O14830 753 aa18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 PFKMP08237 780 aa18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 PLEKP08567 350 aaPredicted RBP18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 KRT5P13647 590 aa18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 ACO1P21399 889 aaKnown RBP18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 MSNP26038 577 aaKnown RBP18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 CYLC1P35663 651 aaPredicted RBP18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 EIF4A3P38919 411 aaKnown RBP18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 PBX2P40425 430 aa18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 YWHAEP62258 255 aaKnown RBP18.08■□□□□ 0.49
ARFGAP1-220ENST00000547204 TNNC1P63316 161 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms