RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 DSTYKQ6XUX3 929 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 HS2ST1Q7LGA3 356 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 OTOP3Q7RTS5 596 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 ZDHHC14Q8IZN3 488 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 PLCD3Q8N3E9 789 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 TMEM130Q8N3G9 435 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 ZNF461Q8TAF7 563 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 FEZF2Q8TBJ5 459 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 SCFD1Q8WVM8 642 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 ACSF2Q96CM8 615 aaPredicted RBP17.2■□□□□ 0.34
DDX54-204ENST00000546898 PCIF1Q9H4Z3 704 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 PIDD1Q9HB75 910 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 WDR6Q9NNW5 1121 aaKnown RBP17.2■□□□□ 0.34
DDX54-204ENST00000546898 EXOC1Q9NV70 894 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 DPP3Q9NY33 737 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 HSPBP1Q9NZL4 362 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 FBXL5Q9UKA1 691 aa17.2■□□□□ 0.34
DDX54-204ENST00000546898 WDR27A2RRH5 827 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 GOLGA8IPA6NC78 632 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 GOLGA8JA6NMD2 632 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 GPR37L1O60883 481 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 ABLIM3O94929 683 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 OAZ2O95190 189 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 ODC1P11926 461 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 SP100P23497 879 aaPredicted RBP17.19■□□□□ 0.34
DDX54-204ENST00000546898 TAF6P49848 677 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 SURF1Q15526 300 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 TPGS2Q68CL5 300 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 USP37Q86T82 979 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 ZSWIM2Q8NEG5 633 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 SLC7A14Q8TBB6 771 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 CACTINQ8WUQ7 758 aaKnown RBP17.19■□□□□ 0.34
DDX54-204ENST00000546898 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 ZNF560Q96MR9 790 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 GDPD2Q9HCC8 539 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 SLC39A2Q9NP94 309 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 AGPAT3Q9NRZ7 376 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 MAFFQ9ULX9 164 aa17.19■□□□□ 0.34
DDX54-204ENST00000546898 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 TGFB1I1O43294 461 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 XYLBO75191 536 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 PNPLA4P41247 253 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 PTPN21Q16825 1174 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 KMT5BQ4FZB7 885 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 TMEM31Q5JXX7 168 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 KRBA2Q6ZNG9 492 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 NELFCDQ8IXH7 590 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 C12orf56Q8IXR9 622 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 GOLGA5Q8TBA6 731 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 NOC3LQ8WTT2 800 aaKnown RBP17.18■□□□□ 0.34
DDX54-204ENST00000546898 CCDC47Q96A33 483 aaKnown RBP17.18■□□□□ 0.34
DDX54-204ENST00000546898 SENP8Q96LD8 212 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 GOLPH3LQ9H4A5 285 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 RAPGEFL1Q9UHV5 662 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 TECTAO75443 2155 aa17.18■□□□□ 0.34
DDX54-204ENST00000546898 OR6C75A6NL08 312 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 SPTLC1O15269 473 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 ATF2P15336 505 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 ELF1P32519 619 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 WNT7BP56706 349 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 TFAMQ00059 246 aaKnown RBP17.17■□□□□ 0.34
DDX54-204ENST00000546898 KNOP1Q1ED39 458 aaKnown RBP17.17■□□□□ 0.34
DDX54-204ENST00000546898 SV2CQ496J9 727 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 OVOS1Q6IE37 1185 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 TCEAL8Q8IYN2 117 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 XXYLT1Q8NBI6 393 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 NOTCH4Q99466 2003 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 C11orf16Q9NQ32 467 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 AFF4Q9UHB7 1163 aaKnown RBP17.17■□□□□ 0.34
DDX54-204ENST00000546898 ITGA11Q9UKX5 1188 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 DSEQ9UL01 958 aa17.17■□□□□ 0.34
DDX54-204ENST00000546898 CIZ1Q9ULV3 898 aaPredicted RBP17.17■□□□□ 0.34
DDX54-204ENST00000546898 GOLGA6L4A6NEF3 574 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 ZNF202O95125 648 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 RPN1P04843 607 aaKnown RBP17.16■□□□□ 0.34
DDX54-204ENST00000546898 CYP11A1P05108 521 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 TMEM191BP0C7N4 346 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 CPB1P15086 417 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 ARPP19P56211 112 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 STK4Q13043 487 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 MYBPC2Q14324 1141 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 CBWD2Q8IUF1 395 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 LRRC52Q8N7C0 313 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 C1orf127Q8N9H9 656 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 KIAA0895Q8NCT3 520 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 EDAQ92838 391 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 ANKRD36BP1Q96IX9 119 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 PDE11AQ9HCR9 933 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 SORCS3Q9UPU3 1222 aa17.16■□□□□ 0.34
DDX54-204ENST00000546898 TIMM13Q9Y5L4 95 aaPredicted RBP17.16■□□□□ 0.34
DDX54-204ENST00000546898 PRR33A8MZF0 331 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 CCL16O15467 120 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 RHOBTB3O94955 611 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 KIF20AO95235 890 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 LRG1P02750 347 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 ITGB3P05106 788 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 POLR2BP30876 1174 aaKnown RBP17.15■□□□□ 0.34
DDX54-204ENST00000546898 ZXDAP98168 799 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 DPYDQ12882 1025 aa17.15■□□□□ 0.34
DDX54-204ENST00000546898 SNRNP35Q16560 246 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms