RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 TRIP4Q15650 581 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-223ENST00000545440 ZNF787Q6DD87 383 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 RBM23Q86U06 439 aaKnown RBP8.45□□□□□ -1.06
SNHG1-223ENST00000545440 ZNF280BQ86YH2 543 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 ADHFE1Q8IWW8 467 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 MRPL43Q8N983 215 aaKnown RBP8.45□□□□□ -1.06
SNHG1-223ENST00000545440 VN1R2Q8NFZ6 395 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 DEPTORQ8TB45 409 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 INTS4Q96HW7 963 aaKnown RBP8.45□□□□□ -1.06
SNHG1-223ENST00000545440 IFT74Q96LB3 600 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 DRC1Q96MC2 740 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 FAM193BQ96PV7 902 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-223ENST00000545440 GAD1Q99259 594 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 ADPGKQ9BRR6 497 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 TIPINQ9BVW5 301 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 GSX2Q9BZM3 304 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 GBP3Q9H0R5 595 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 PDZD7Q9H5P4 517 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 C17orf75Q9HAS0 396 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 CUEDC1Q9NWM3 386 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-223ENST00000545440 KCND2Q9NZV8 630 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 BARX2Q9UMQ3 279 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-223ENST00000545440 DNM3Q9UQ16 869 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 HES2Q9Y543 173 aa8.45□□□□□ -1.06
SNHG1-223ENST00000545440 TECTAO75443 2155 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.44□□□□□ -1.06
SNHG1-223ENST00000545440 VPS37CA5D8V6 355 aaPredicted RBP8.44□□□□□ -1.06
SNHG1-223ENST00000545440 E9PMD0 336 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 PER2O15055 1255 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 DDHD2O94830 711 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 NPTXRO95502 500 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 POMCP01189 267 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 EDN3P14138 238 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 HOXB8P17481 243 aaPredicted RBP8.44□□□□□ -1.06
SNHG1-223ENST00000545440 NFKB1P19838 968 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 MX2P20592 715 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 GUCY2CP25092 1073 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 CDC25AP30304 524 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 SCNN1GP51170 649 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 AFF1P51825 1210 aaKnown RBP8.44□□□□□ -1.06
SNHG1-223ENST00000545440 PLAURQ03405 335 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 MAPK7Q13164 816 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 PSMD2Q13200 908 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 CLUL1Q15846 466 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 DCAF4L1Q3SXM0 396 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 TMEM119Q4V9L6 283 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 RINT1Q6NUQ1 792 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 APBB1IPQ7Z5R6 666 aaPredicted RBP8.44□□□□□ -1.06
SNHG1-223ENST00000545440 COLGALT2Q8IYK4 626 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 VPS52Q8N1B4 723 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 GSTCDQ8NEC7 633 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 BCL7CQ8WUZ0 217 aaPredicted RBP8.44□□□□□ -1.06
SNHG1-223ENST00000545440 CASP10Q92851 521 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 CDK5RAP3Q96JB5 506 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 RPS6KC1Q96S38 1066 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 KIFC3Q9BVG8 833 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 RUSC1Q9BVN2 902 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 VN1R3Q9BXE9 311 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 C1QTNF1Q9BXJ1 281 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 CD320Q9NPF0 282 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 MARCH5Q9NX47 278 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 ARHGAP28Q9P2N2 729 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 HCFC2Q9Y5Z7 792 aa8.44□□□□□ -1.06
SNHG1-223ENST00000545440 K7ELQ4 463 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-223ENST00000545440 NRP1O14786 923 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 GIPC1O14908 333 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 CLASP2O75122 1294 aaKnown RBP8.43□□□□□ -1.06
SNHG1-223ENST00000545440 HIP1RO75146 1068 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 EFEMP2O95967 443 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 SOD2P04179 222 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 ALDH2P05091 517 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 EDN1P05305 212 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 NPTX2P47972 431 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 SLC12A3P55017 1021 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 RBM10P98175 930 aaKnown RBP8.43□□□□□ -1.06
SNHG1-223ENST00000545440 HYAL2Q12891 473 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 ORC1Q13415 861 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 PTPN14Q15678 1187 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 ANKRD54Q6NXT1 300 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 C1orf186Q6ZWK4 172 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 KCNK18Q7Z418 384 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 CDR2LQ86X02 465 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-223ENST00000545440 RNF168Q8IYW5 571 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-223ENST00000545440 DAW1Q8N136 415 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 SYT2Q8N9I0 419 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-223ENST00000545440 SUSD6Q92537 303 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 HERC2P3Q9BVR0 1158 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 APOL6Q9BWW8 343 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 NDFIP2Q9NV92 336 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 DZANK1Q9NVP4 752 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 TMEM63CQ9P1W3 806 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 KCNG1Q9UIX4 513 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 FAN1Q9Y2M0 1017 aa8.43□□□□□ -1.06
SNHG1-223ENST00000545440 USP15Q9Y4E8 981 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-223ENST00000545440 SCN1AP35498 2009 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 CCDC169A6NNP5 214 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 PI4K2BG5E9Z4 385 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 K7ERI5 159 aa8.42□□□□□ -1.06
SNHG1-223ENST00000545440 GADD45BO75293 160 aaPredicted RBP8.42□□□□□ -1.06
SNHG1-223ENST00000545440 RECQL4O94761 1208 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms