RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 PSMD14O00487 310 aa9.02□□□□□ -0.97
ATXN3-216ENST00000545170 MKRN4PQ13434 485 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-216ENST00000545170 COBLL1Q53SF7 1204 aa9.02□□□□□ -0.97
ATXN3-216ENST00000545170 LRRC8DQ7L1W4 858 aa9.02□□□□□ -0.97
ATXN3-216ENST00000545170 ARID3BQ8IVW6 561 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-216ENST00000545170 HACE1Q8IYU2 909 aa9.02□□□□□ -0.97
ATXN3-216ENST00000545170 C7orf31Q8N865 590 aa9.02□□□□□ -0.97
ATXN3-216ENST00000545170 ZNF579Q8NAF0 562 aaKnown RBP9.02□□□□□ -0.97
ATXN3-216ENST00000545170 NYXQ9GZU5 481 aa9.02□□□□□ -0.97
ATXN3-216ENST00000545170 TASP1Q9H6P5 420 aa9.02□□□□□ -0.97
ATXN3-216ENST00000545170 RABL2AQ9UBK7 228 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-216ENST00000545170 SEPT9Q9UHD8 586 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-216ENST00000545170 STON1Q9Y6Q2 735 aa9.02□□□□□ -0.97
ATXN3-216ENST00000545170 ZNF233A6NK53 670 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 MEI4A8MW99 385 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 PRPF4O43172 522 aaKnown RBP eCLIP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 LGR5O75473 907 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 EPHB2P29323 1055 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 ATN1P54259 1190 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 MCL1Q07820 350 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 TFDP2Q14188 446 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 TCHHL1Q5QJ38 904 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 HEATR6Q6AI08 1181 aaKnown RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 KRT74Q7RTS7 529 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 KRT26Q7Z3Y9 468 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 SDR42E1Q8WUS8 393 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 NGRNQ9NPE2 291 aaKnown RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 KRT84Q9NSB2 600 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 PRG4Q92954 1404 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 EIF2AK4Q9P2K8 1649 aaKnown RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 VWA5AO00534 786 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 POLR2MP0CAP2 368 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 ATP6V1B2P21281 511 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 AKAP5P24588 427 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 SWT1Q5T5J6 900 aaKnown RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 ZNF746Q6NUN9 644 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 NECAB2Q7Z6G3 386 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 RFFLQ8WZ73 363 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 RNF26Q9BY78 433 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 FBXO28Q9NVF7 368 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 NOS1P29475 1434 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 WEE2P0C1S8 567 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 STARP49675 285 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 POLA2Q14181 598 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 ARL13BQ3SXY8 428 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 RHOT1Q8IXI2 618 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 ANKRD49Q8WVL7 239 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 GCNAQ96QF7 691 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 PPCSQ9HAB8 311 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 POLG2Q9UHN1 485 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 M0QZ92 97 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 AGRPO00253 132 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 LIN7AO14910 233 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 THRAP10827 490 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 MAGEA4P43358 317 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 QARSP47897 775 aaKnown RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 GCLCP48506 637 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 SRP54P61011 504 aaKnown RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 TFAMQ00059 246 aaKnown RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 MARK2Q7KZI7 788 aaKnown RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 SVOPQ8N4V2 548 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 FAM89AQ96GI7 184 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 AFF4Q9UHB7 1163 aaKnown RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 PLCL2Q9UPR0 1127 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 TRIM64CA6NLI5 447 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 BIRC5O15392 142 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 MAGEA10P43363 369 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 CSNK2BP67870 215 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 KCNH2Q12809 1159 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 EPS8Q12929 822 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 MMRN1Q13201 1228 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 ATP13A5Q4VNC0 1218 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 MTHFD1LQ6UB35 978 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 ZNF589Q86UQ0 364 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 CENPLQ8N0S6 344 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-216ENST00000545170 PSMA8Q8TAA3 256 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 ROGDIQ9GZN7 287 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 KLHL11Q9NVR0 708 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 SLC12A6Q9UHW9 1150 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 ING4Q9UNL4 249 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 SLC12A4Q9UP95 1085 aa9.01□□□□□ -0.97
ATXN3-216ENST00000545170 FANCD2Q9BXW9 1451 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 UBA6A0AVT1 1052 aaPredicted RBP9□□□□□ -0.97
ATXN3-216ENST00000545170 F8W8V4 182 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 SERPINB9P50453 376 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 DDI2Q5TDH0 399 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 MZT2BQ6NZ67 158 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 JAMLQ86YT9 394 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 LRRC47Q8N1G4 583 aaKnown RBP9□□□□□ -0.97
ATXN3-216ENST00000545170 TBCKQ8TEA7 893 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 RNFT2Q96EX2 444 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 ELMO2Q96JJ3 720 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 CNPY3Q9BT09 278 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 BAIAP2Q9UQB8 552 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 MAP3K13O43283 966 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 SPDYE7PQ495Y7 208 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 C3orf62Q6ZUJ4 267 aa9□□□□□ -0.97
ATXN3-216ENST00000545170 LRRC20Q8TCA0 184 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms