RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 SMYD5Q6GMV2 418 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 KIAA1841Q6NSI8 718 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 DPH6Q7L8W6 267 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 VPS52Q8N1B4 723 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 AOPEPQ8N6M6 819 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 FBXL13Q8NEE6 735 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 POF1BQ8WVV4 589 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 MRPL38Q96DV4 380 aaKnown RBP12.65□□□□□ -0.38
SNHG1-221ENST00000544983 HPDLQ96IR7 371 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 TUBGCP2Q9BSJ2 902 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 TTPALQ9BTX7 342 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 TTYH1Q9H313 450 aaPredicted RBP12.65□□□□□ -0.38
SNHG1-221ENST00000544983 FAM124BQ9H5Z6 455 aaPredicted RBP12.65□□□□□ -0.38
SNHG1-221ENST00000544983 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNHG1-221ENST00000544983 CHST7Q9NS84 486 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 SAMSN1Q9NSI8 373 aaKnown RBP12.65□□□□□ -0.38
SNHG1-221ENST00000544983 FANCLQ9NW38 375 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 SIX4Q9UIU6 781 aa12.65□□□□□ -0.38
SNHG1-221ENST00000544983 GOLGA6L19H0YKK7 550 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 LPXNO60711 386 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 C1RP00736 705 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 AFPP02771 609 aaKnown RBP12.64□□□□□ -0.39
SNHG1-221ENST00000544983 URODP06132 367 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 CTSAP10619 480 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 ODC1P11926 461 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 ZNF18P17022 549 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 TYMPP19971 482 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 CDK11BP21127 795 aaKnown RBP12.64□□□□□ -0.39
SNHG1-221ENST00000544983 FGFR3P22607 806 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 PIK3CAP42336 1068 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 GUCY2FP51841 1108 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 DSG1Q02413 1049 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 NCAPHQ15003 741 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 IQCB1Q15051 598 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 WDR44Q5JSH3 913 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 CD300LGQ6UXG3 332 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 ANKS3Q6ZW76 656 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 TMC7Q7Z402 723 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 TMEM173Q86WV6 379 aaPredicted RBP12.64□□□□□ -0.39
SNHG1-221ENST00000544983 DHX40Q8IX18 779 aaKnown RBP12.64□□□□□ -0.39
SNHG1-221ENST00000544983 C3orf58Q8NDZ4 430 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 GAS2L1Q99501 681 aaPredicted RBP12.64□□□□□ -0.39
SNHG1-221ENST00000544983 HERC2P3Q9BVR0 1158 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 GPR62Q9BZJ7 368 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 ALG13Q9NP73 1137 aaKnown RBP12.64□□□□□ -0.39
SNHG1-221ENST00000544983 MRPL17Q9NRX2 175 aaKnown RBP12.64□□□□□ -0.39
SNHG1-221ENST00000544983 PCDHB8Q9UN66 801 aa12.64□□□□□ -0.39
SNHG1-221ENST00000544983 H7C4K7 107 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 GRM6O15303 877 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 HUS1O60921 280 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 VNN1O95497 513 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 ASS1P00966 412 aaKnown RBP12.63□□□□□ -0.39
SNHG1-221ENST00000544983 CST3P01034 146 aaPredicted RBP12.63□□□□□ -0.39
SNHG1-221ENST00000544983 HLA-DRAP01903 254 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 CYP11A1P05108 521 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 GLUD2P49448 558 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 MYL7Q01449 175 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 SMC1AQ14683 1233 aaKnown RBP12.63□□□□□ -0.39
SNHG1-221ENST00000544983 ZNF699Q32M78 642 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 TIGD5Q53EQ6 642 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 DSTYKQ6XUX3 929 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 CREBRFQ8IUR6 639 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 TMEM86AQ8N2M4 240 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 TTC39CQ8N584 583 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 TOP6BLQ8N6T0 577 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 BCL7CQ8WUZ0 217 aaPredicted RBP12.63□□□□□ -0.39
SNHG1-221ENST00000544983 PIK3R5Q8WYR1 880 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 RABGGTAQ92696 567 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 SENP8Q96LD8 212 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 TCF25Q9BQ70 676 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 ZBP1Q9H171 429 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 XYLT2Q9H1B5 865 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 NDST4Q9H3R1 872 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 CERS4Q9HA82 394 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 CBX8Q9HC52 389 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 ENTPD7Q9NQZ7 604 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 RAB20Q9NX57 234 aa12.63□□□□□ -0.39
SNHG1-221ENST00000544983 LIMA1Q9UHB6 759 aaKnown RBP12.63□□□□□ -0.39
SNHG1-221ENST00000544983 SCN1AP35498 2009 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 CYB561D2O14569 222 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 PPEF2O14830 753 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 FSCN2O14926 492 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 OAZ2O95190 189 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 MYL6P60660 151 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 TNNC1P63316 161 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 GRIN2CQ14957 1233 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 WDR72Q3MJ13 1102 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 CBWD6Q4V339 395 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 VWA3BQ502W6 1294 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 ZNF667Q5HYK9 610 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 CBWD3Q5JTY5 395 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 CBWD5Q5RIA9 395 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 KIAA0319Q5VV43 1072 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 LIMS2Q7Z4I7 341 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 SPRED2Q7Z698 418 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 METTL23Q86XA0 190 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 DEFB123Q8N688 67 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 MRPL43Q8N983 215 aaKnown RBP12.62□□□□□ -0.39
SNHG1-221ENST00000544983 MICAL1Q8TDZ2 1067 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms