RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PSMD5Q16401 504 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 SV2CQ496J9 727 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 DSTYKQ6XUX3 929 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 GPR65Q8IYL9 337 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 LRRC52Q8N7C0 313 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 VN1R2Q8NFZ6 395 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 LNX1Q8TBB1 728 aaPredicted RBP16.27■□□□□ 0.2
CD9-210ENST00000543916 PPP2R3CQ969Q6 453 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 SENP8Q96LD8 212 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 KLHL5Q96PQ7 755 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 RXFP1Q9HBX9 757 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 SSX2IPQ9Y2D8 614 aa16.27■□□□□ 0.2
CD9-210ENST00000543916 MYO7AQ13402 2215 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 KPNA7A9QM74 516 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 SYN3O14994 580 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 TEX28O15482 410 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 VNN1O95497 513 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 GLP2RO95838 553 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 PNPLA4P41247 253 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 ENPEPQ07075 957 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 PPP3CAQ08209 521 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 COL19A1Q14993 1142 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 VARS2Q5ST30 1063 aaKnown RBP16.26■□□□□ 0.19
CD9-210ENST00000543916 SASS6Q6UVJ0 657 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 FILIP1Q7Z7B0 1213 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 GLYCTKQ8IVS8 523 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 EFHBQ8N7U6 833 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 SYAP1Q96A49 352 aaPredicted RBP16.26■□□□□ 0.19
CD9-210ENST00000543916 SRRTQ9BXP5 876 aaKnown RBP16.26■□□□□ 0.19
CD9-210ENST00000543916 EMILIN2Q9BXX0 1053 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 PRDM6Q9NQX0 595 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 FNIP2Q9P278 1114 aa16.26■□□□□ 0.19
CD9-210ENST00000543916 TIMM13Q9Y5L4 95 aaPredicted RBP16.26■□□□□ 0.19
CD9-210ENST00000543916 CYB561D2O14569 222 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 IKBKBO14920 756 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 ADAM12O43184 909 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 ODC1P11926 461 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 PAX3P23760 479 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 GCLMP48507 274 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 AP3M2P53677 418 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 ADAM15Q13444 863 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 BIRC3Q13489 604 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 KCNC3Q14003 757 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 MRPL58Q14197 206 aaKnown RBP16.25■□□□□ 0.19
CD9-210ENST00000543916 SKIV2LQ15477 1246 aaKnown RBP16.25■□□□□ 0.19
CD9-210ENST00000543916 CTC1Q2NKJ3 1217 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 ZACNQ401N2 412 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 RSPO2Q6UXX9 243 aaPredicted RBP16.25■□□□□ 0.19
CD9-210ENST00000543916 C15orf39Q6ZRI6 1047 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 C11orf57Q6ZUT1 292 aaPredicted RBP16.25■□□□□ 0.19
CD9-210ENST00000543916 ANKS3Q6ZW76 656 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 SV2AQ7L0J3 742 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 USP37Q86T82 979 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 HPDLQ96IR7 371 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 CDCA3Q99618 268 aaPredicted RBP16.25■□□□□ 0.19
CD9-210ENST00000543916 CLSTN3Q9BQT9 956 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.25■□□□□ 0.19
CD9-210ENST00000543916 MTRRQ9UBK8 725 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 ARMCX3Q9UH62 379 aaPredicted RBP16.25■□□□□ 0.19
CD9-210ENST00000543916 DACH1Q9UI36 760 aa16.25■□□□□ 0.19
CD9-210ENST00000543916 TBC1D4O60343 1298 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 PHACTR2O75167 634 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 KLRC2P26717 231 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 ERCC5P28715 1186 aaPredicted RBP16.24■□□□□ 0.19
CD9-210ENST00000543916 NDUFV1P49821 464 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 MYL6P60660 151 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 CREMQ03060 361 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 STX1AQ16623 288 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 CCDC40Q4G0X9 1142 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 DCAF17Q5H9S7 520 aaPredicted RBP16.24■□□□□ 0.19
CD9-210ENST00000543916 LLGL2Q6P1M3 1020 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 PDXDC1Q6P996 788 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 FRMD5Q7Z6J6 570 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 APPL2Q8NEU8 664 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 SLC22A17Q8WUG5 538 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 SLC35C1Q96A29 364 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 PABPC5Q96DU9 382 aaKnown RBP16.24■□□□□ 0.19
CD9-210ENST00000543916 XYLT2Q9H1B5 865 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 MMRN2Q9H8L6 949 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 GDAP2Q9NXN4 497 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 CLDND1Q9NY35 253 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 HCFC2Q9Y5Z7 792 aa16.24■□□□□ 0.19
CD9-210ENST00000543916 TBX10O75333 385 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 CYP11A1P05108 521 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 ADH1AP07327 375 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 EPCAMP16422 314 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 TYMPP19971 482 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 LTBRP36941 435 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 CLCN4P51793 760 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 YWHAHQ04917 246 aaPredicted RBP16.23■□□□□ 0.19
CD9-210ENST00000543916 TYRO3Q06418 890 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 DLX2Q07687 328 aaPredicted RBP16.23■□□□□ 0.19
CD9-210ENST00000543916 MYO1EQ12965 1108 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 TRPC3Q13507 836 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 NCOA4Q13772 614 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 NFKBIBQ15653 356 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 TCERG1LQ5VWI1 586 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 IRF2BP1Q8IU81 584 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 ELMO3Q96BJ8 720 aa16.23■□□□□ 0.19
CD9-210ENST00000543916 UBE2ZQ9H832 354 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms