RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 ELOA2Q8IYF1 753 aaPredicted RBP20.24■□□□□ 0.83
HDAC4-215ENST00000543185 CNKSR1Q969H4 720 aa20.24■□□□□ 0.83
HDAC4-215ENST00000543185 DCUN1D1Q96GG9 259 aa20.24■□□□□ 0.83
HDAC4-215ENST00000543185 ZSWIM5Q9P217 1185 aa20.24■□□□□ 0.83
HDAC4-215ENST00000543185 PAK5Q9P286 719 aa20.24■□□□□ 0.83
HDAC4-215ENST00000543185 HERC5Q9UII4 1024 aaKnown RBP20.24■□□□□ 0.83
HDAC4-215ENST00000543185 INPP5FQ9Y2H2 1132 aa20.24■□□□□ 0.83
HDAC4-215ENST00000543185 HPS3Q969F9 1004 aa20.24■□□□□ 0.83
HDAC4-215ENST00000543185 MYH13Q9UKX3 1938 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 SMIM31A0A1B0GVY4 71 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 M0QYV0 167 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 UBTFL6P0CB48 400 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-215ENST00000543185 ASIC4Q96FT7 647 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 SARS2Q9NP81 518 aaKnown RBP20.23■□□□□ 0.83
HDAC4-215ENST00000543185 ARHGEF38Q9NXL2 777 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 ERAP1Q9NZ08 941 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 SPANXN2Q5MJ10 180 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 NFKBIL1Q9UBC1 381 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-215ENST00000543185 A2ML1A8K2U0 1454 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 IL6P05231 212 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 HIST1H2AGP0C0S8 130 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-215ENST00000543185 HIST1H2ADP20671 130 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 ZBTB33Q86T24 672 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 HIST1H2AHQ96KK5 128 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 HIST1H2AJQ99878 128 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 C11orf70Q9BRQ4 267 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 H2AFJQ9BTM1 129 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 LGR6Q9HBX8 967 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 AIM2O14862 343 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 RFX8Q6ZV50 586 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 SCFD2Q8WU76 684 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 B2RBV5 119 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 GCLMP48507 274 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 DCTN2Q13561 401 aaKnown RBP20.23■□□□□ 0.83
HDAC4-215ENST00000543185 SEPT1Q8WYJ6 367 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 S100A9P06702 114 aaKnown RBP20.23■□□□□ 0.83
HDAC4-215ENST00000543185 CNTFP26441 200 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 COG2Q14746 738 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 APEX2Q9UBZ4 518 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 FKBP9O95302 570 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 MLH1P40692 756 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 FAM83EQ2M2I3 478 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 PADI6Q6TGC4 694 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 FKBP9P1Q75LS8 142 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 ZNF677Q86XU0 584 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 RNF135Q8IUD6 432 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 DCPSQ96C86 337 aaKnown RBP20.23■□□□□ 0.83
HDAC4-215ENST00000543185 ZBTB10Q96DT7 871 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 RXFP1Q9HBX9 757 aa20.23■□□□□ 0.83
HDAC4-215ENST00000543185 RRM2P31350 389 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 ATP2C1P98194 919 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-215ENST00000543185 TRIQKQ629K1 86 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 OMA1Q96E52 524 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 NDFIP2Q9NV92 336 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 POTEFA5A3E0 1075 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 PSTPIP1O43586 416 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 PEX3P56589 373 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 ARMC4Q5T2S8 1044 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 CACHD1Q5VU97 1274 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 ZNF786Q8N393 782 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 TINF2Q9BSI4 451 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 ILKAPQ9H0C8 392 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-215ENST00000543185 TLR7Q9NYK1 1049 aaKnown RBP20.22■□□□□ 0.83
HDAC4-215ENST00000543185 WHRNQ9P202 907 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 EFCAB6Q5THR3 1501 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 MED26O95402 600 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 A1BGP04217 495 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 MMGT1Q8N4V1 131 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 ERP44Q9BS26 406 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 AFDNP55196 1824 aaKnown RBP20.22■□□□□ 0.83
HDAC4-215ENST00000543185 CDK17Q00537 523 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 C12orf60Q5U649 245 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 PIGOQ8TEQ8 1089 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 CEP44Q9C0F1 390 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 CHMP2BQ9UQN3 213 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 ARIH1Q9Y4X5 557 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-215ENST00000543185 EPS8Q12929 822 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 SUPT20HL1Q3ZLR7 823 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 UGT3A1Q6NUS8 523 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 TRIM65Q6PJ69 517 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 ZNF560Q96MR9 790 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 ABCA9Q8IUA7 1624 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 USP11P51784 963 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 ZNF568Q3ZCX4 644 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 ATPAF2Q8N5M1 289 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 RSAD1Q9HA92 442 aa20.22■□□□□ 0.83
HDAC4-215ENST00000543185 FASTKD5Q7L8L6 764 aaKnown RBP20.21■□□□□ 0.83
HDAC4-215ENST00000543185 OSBPL10Q9BXB5 764 aa20.21■□□□□ 0.83
HDAC4-215ENST00000543185 EXOSC4Q9NPD3 245 aaKnown RBP20.21■□□□□ 0.83
HDAC4-215ENST00000543185 ARID5BQ14865 1188 aa20.21■□□□□ 0.83
HDAC4-215ENST00000543185 TMEM179Q6ZVK1 233 aa20.21■□□□□ 0.83
HDAC4-215ENST00000543185 HMG20AQ9NP66 347 aa20.21■□□□□ 0.83
HDAC4-215ENST00000543185 TPI1P60174 286 aa20.21■□□□□ 0.83
HDAC4-215ENST00000543185 MED15Q96RN5 788 aa20.21■□□□□ 0.83
HDAC4-215ENST00000543185 C1orf50Q9BV19 199 aa20.21■□□□□ 0.83
HDAC4-215ENST00000543185 LIMA1Q9UHB6 759 aaKnown RBP20.21■□□□□ 0.83
HDAC4-215ENST00000543185 DYTNA2CJ06 578 aa20.21■□□□□ 0.83
HDAC4-215ENST00000543185 ECSITQ9BQ95 431 aa20.21■□□□□ 0.83
HDAC4-215ENST00000543185 KLHL20Q9Y2M5 609 aa20.21■□□□□ 0.83
HDAC4-215ENST00000543185 CFAP99D6REC4 459 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms