RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
DDB1-221ENST00000543162 UROC1Q96N76 676 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 ZNF830Q96NB3 372 aaPredicted RBP11.45□□□□□ -0.58
DDB1-221ENST00000543162 FAM193BQ96PV7 902 aaPredicted RBP11.45□□□□□ -0.58
DDB1-221ENST00000543162 ARID3AQ99856 593 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 LBHD1Q9BQE6 289 aaPredicted RBP11.45□□□□□ -0.58
DDB1-221ENST00000543162 AIPL1Q9NZN9 384 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 PCDH10Q9P2E7 1040 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 ZMYND8Q9ULU4 1186 aaPredicted RBP11.45□□□□□ -0.58
DDB1-221ENST00000543162 POLIQ9UNA4 740 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 SCN1AP35498 2009 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 PODXLO00592 558 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 GFPT2O94808 682 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 FGBP02675 491 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 CCDC172P0C7W6 258 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 PNMA6AP0CW24 399 aaPredicted RBP11.44□□□□□ -0.58
DDB1-221ENST00000543162 SKILP12757 684 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 KRT5P13647 590 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 FERP16591 822 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 FECHP22830 423 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 ASPAP45381 313 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 KCNJ6P48051 423 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 TAF6P49848 677 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 GATMP50440 423 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 CLCNKBP51801 687 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 WDR5P61964 334 aaKnown RBP11.44□□□□□ -0.58
DDB1-221ENST00000543162 YWHAEP62258 255 aaKnown RBP11.44□□□□□ -0.58
DDB1-221ENST00000543162 MEA1Q16626 185 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 SV2CQ496J9 727 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 E4F1Q66K89 784 aaPredicted RBP11.44□□□□□ -0.58
DDB1-221ENST00000543162 CYP26C1Q6V0L0 522 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 SCARA5Q6ZMJ2 495 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 ZNF365Q70YC5 407 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 OTOP2Q7RTS6 562 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 TMTC1Q8IUR5 882 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 GPIHBP1Q8IV16 184 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 FAM71AQ8IYT1 594 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 CASD1Q96PB1 797 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 MMS19Q96T76 1030 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 MRPL9Q9BYD2 267 aaKnown RBP11.44□□□□□ -0.58
DDB1-221ENST00000543162 BCO2Q9BYV7 579 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 GPR88Q9GZN0 384 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 KCNF1Q9H3M0 494 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 CYP3A43Q9HB55 503 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 TBC1D13Q9NVG8 400 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 CACNG4Q9UBN1 327 aa11.44□□□□□ -0.58
DDB1-221ENST00000543162 TBKBP1A7MCY6 615 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 ZBBXA8MT70 800 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 KPNA7A9QM74 516 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 SERPING1P05155 500 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 WEE2P0C1S8 567 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 CD58P19256 250 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 LILRA4P59901 499 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 DEFB103AP81534 67 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 CCZ1BP86790 482 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 CCZ1P86791 482 aaPredicted RBP11.43□□□□□ -0.58
DDB1-221ENST00000543162 CDK17Q00537 523 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 DSC1Q08554 894 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 KLHL30Q0D2K2 578 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 UPP1Q16831 310 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 TDRD12Q587J7 1177 aaKnown RBP11.43□□□□□ -0.58
DDB1-221ENST00000543162 PSRC1Q6PGN9 363 aaPredicted RBP11.43□□□□□ -0.58
DDB1-221ENST00000543162 WDR59Q6PJI9 974 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 C16orf59Q7L2K0 433 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 IRF2BP2Q7Z5L9 587 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 ZNF280BQ86YH2 543 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 TMEM139Q8IV31 216 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 RABGGTAQ92696 567 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 TOP1MTQ969P6 601 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 SMYD3Q9H7B4 428 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 CISHQ9NSE2 258 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 GDAP2Q9NXN4 497 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 PCDHB4Q9Y5E5 795 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 SNX9Q9Y5X1 595 aa11.43□□□□□ -0.58
DDB1-221ENST00000543162 BZW2Q9Y6E2 419 aaKnown RBP11.43□□□□□ -0.58
DDB1-221ENST00000543162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDB1-221ENST00000543162 SPTLC1O15269 473 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 CYP26A1O43174 497 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 ARHGAP6O43182 974 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 HUS1O60921 280 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 DGKIO75912 1065 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 B3GAT3O94766 335 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 DDHD2O94830 711 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 ACO1P21399 889 aaKnown RBP11.42□□□□□ -0.58
DDB1-221ENST00000543162 PAX3P23760 479 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 PRKCIP41743 596 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 RAP1GAPP47736 663 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 EPHB4P54760 987 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 CDH8P55286 799 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 PAN2Q504Q3 1202 aaKnown RBP11.42□□□□□ -0.58
DDB1-221ENST00000543162 TMEM240Q5SV17 173 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 SMYD5Q6GMV2 418 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 FAM117BQ6P1L5 589 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 DCLRE1AQ6PJP8 1040 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 TMEM270Q6UE05 265 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 COLGALT2Q8IYK4 626 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 LRRC43Q8N309 656 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 TTC39CQ8N584 583 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 UBR7Q8N806 425 aa11.42□□□□□ -0.58
DDB1-221ENST00000543162 CHP1Q99653 195 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms