RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CCDC40Q4G0X9 1142 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 TCEAL5Q5H9L2 206 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 TDRD10Q5VZ19 366 aaKnown RBP18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 DSTYKQ6XUX3 929 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 SV2AQ7L0J3 742 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 ADGRD2Q7Z7M1 963 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 MICALL1Q8N3F8 863 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 RIN2Q8WYP3 895 aaPredicted RBP18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 PIK3R5Q8WYR1 880 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 PCDHB8Q9UN66 801 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 SCN1AP35498 2009 aa18.44■□□□□ 0.54
RABGGTA-203ENST00000543002 KPNA7A9QM74 516 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 C2CD2LO14523 706 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 STX10O60499 249 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 PHACTR2O75167 634 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 GTF2H1P32780 548 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 CA8P35219 290 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 MARSP56192 900 aaKnown RBP18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 PPP3CAQ08209 521 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 MYO1EQ12965 1108 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 BIRC3Q13489 604 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 TRPC3Q13507 836 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 TPD52L1Q16890 204 aaPredicted RBP18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 PDXDC1Q6P996 788 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 C15orf39Q6ZRI6 1047 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 C11orf57Q6ZUT1 292 aaPredicted RBP18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 APPL2Q8NEU8 664 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 ENOX1Q8TC92 643 aaKnown RBP18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 SENP8Q96LD8 212 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 TLE6Q9H808 572 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 RXFP1Q9HBX9 757 aa18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.43■□□□□ 0.54
RABGGTA-203ENST00000543002 ARHGEF37A1IGU5 675 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 CCDC192P0DO97 292 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 GCLMP48507 274 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 DCAF17Q5H9S7 520 aaPredicted RBP18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 TCERG1LQ5VWI1 586 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 PRSS55Q6UWB4 352 aaPredicted RBP18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 ANKS3Q6ZW76 656 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 LNX1Q8TBB1 728 aaPredicted RBP18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 SLC35C1Q96A29 364 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 HPDLQ96IR7 371 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 CDCA3Q99618 268 aaPredicted RBP18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 EMILIN2Q9BXX0 1053 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 THAP9Q9H5L6 903 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 TMEM8AQ9HCN3 771 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 GDAP2Q9NXN4 497 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 FNIP2Q9P278 1114 aa18.42■□□□□ 0.54
RABGGTA-203ENST00000543002 VWA8A3KMH1 1905 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 SYCE3A1L190 88 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 CYB561D2O14569 222 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 VNN1O95497 513 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 STAU1O95793 577 aaKnown RBP18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 CNPP09543 421 aaKnown RBP18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 ODC1P11926 461 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 TYMPP19971 482 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 ATICP31939 592 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 NRIP1P48552 1158 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 MYL6P60660 151 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 CREMQ03060 361 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 HYAL1Q12794 435 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 NCOA4Q13772 614 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 MRPL58Q14197 206 aaKnown RBP18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 CCDC85BQ15834 202 aaPredicted RBP18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 PSMD5Q16401 504 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 DUSP6Q16828 381 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 VARS2Q5ST30 1063 aaKnown RBP18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 KRT39Q6A163 491 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 RBM23Q86U06 439 aaKnown RBP18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 IRF2BP1Q8IU81 584 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 TRIM59Q8IWR1 403 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 MAFAQ8NHW3 353 aaPredicted RBP18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 KLHL5Q96PQ7 755 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 FUCA2Q9BTY2 467 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 DNAJC25Q9H1X3 360 aa18.41■□□□□ 0.54
RABGGTA-203ENST00000543002 H7C4K7 107 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 PER2O15055 1255 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 TEX28O15482 410 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 CYP11A1P05108 521 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 MXI1P50539 228 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 ZSCAN23Q3MJ62 389 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 CNOT6LQ96LI5 555 aaKnown RBP18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 XYLT2Q9H1B5 865 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 MMRN2Q9H8L6 949 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 VRTNQ9H8Y1 702 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 MTRRQ9UBK8 725 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 DSEQ9UL01 958 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 TIMM13Q9Y5L4 95 aaPredicted RBP18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 BACE2Q9Y5Z0 518 aa18.4■□□□□ 0.54
RABGGTA-203ENST00000543002 FSD2A1L4K1 749 aa18.39■□□□□ 0.53
RABGGTA-203ENST00000543002 NCK2O43639 380 aa18.39■□□□□ 0.53
RABGGTA-203ENST00000543002 TBC1D4O60343 1298 aa18.39■□□□□ 0.53
RABGGTA-203ENST00000543002 CLASP2O75122 1294 aaKnown RBP18.39■□□□□ 0.53
RABGGTA-203ENST00000543002 OAZ2O95190 189 aa18.39■□□□□ 0.53
RABGGTA-203ENST00000543002 HLA-DRAP01903 254 aa18.39■□□□□ 0.53
RABGGTA-203ENST00000543002 ADH1AP07327 375 aa18.39■□□□□ 0.53
RABGGTA-203ENST00000543002 GTF2F1P35269 517 aaKnown RBP eCLIP18.39■□□□□ 0.53
RABGGTA-203ENST00000543002 PIK3CAP42336 1068 aa18.39■□□□□ 0.53
RABGGTA-203ENST00000543002 YWHAHQ04917 246 aaPredicted RBP18.39■□□□□ 0.53
RABGGTA-203ENST00000543002 SGSM1Q2NKQ1 1148 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms