RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PLGRKTQ9HBL7 147 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 VTA1Q9NP79 307 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 CD93Q9NPY3 652 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 CYP39A1Q9NYL5 469 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 PLK2Q9NYY3 685 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.61□□□□□ -1.673e-11■□□□□ 8.9
SNHG1-219ENST00000542112 SAMD15Q9P1V8 674 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 KLHL42Q9P2K6 505 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 DNAJB4Q9UDY4 337 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SEC63Q9UGP8 760 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 PPT2Q9UMR5 302 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 CFL2Q9Y281 166 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 PCDHB14Q9Y5E9 798 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 USH1CQ9Y6N9 552 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 SBNO1A3KN83 1393 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 IQSEC2Q5JU85 1478 aa4.61□□□□□ -1.67
SNHG1-219ENST00000542112 ZNF142P52746 1687 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 RIMS1Q86UR5 1692 aaKnown RBP4.61□□□□□ -1.67
SNHG1-219ENST00000542112 A0A0A0MRY4 1105 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 ST20-MTHFSA0A0A6YYL1 179 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 LOC100289279A0A1B0GTE1 492 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 NOTOA8MTQ0 251 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 B8ZZF3 427 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 H0Y3Z8 333 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 GOLGA8RI6L899 631 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 RGS13O14921 159 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 B4GALT4O60513 344 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 CNOT3O75175 753 aaKnown RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 DEAF1O75398 565 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 OXSR1O95747 527 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 GNA14O95837 355 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 OLFM2O95897 454 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 ECDO95905 644 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 LDHCP07864 332 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 GLI1P08151 1106 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 RHOXF2BP0C7M4 288 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 CALM1P0DP23 149 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 CALM2P0DP24 149 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 CALM3P0DP25 149 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 SFTPCP11686 197 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 VAV1P15498 845 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 KCNA6P17658 529 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 KCNA3P22001 575 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 IL10P22301 178 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 TMOD1P28289 359 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 TRIM23P36406 574 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 TSPAN7P41732 249 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 IFNAR2P48551 515 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 PCYT1AP49585 367 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 HNRNPFP52597 415 aaKnown RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 ATP6V0D1P61421 351 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 AMPD2Q01433 879 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 CLCQ05315 142 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 STK3Q13188 491 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 ITGB3BPQ13352 177 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 TRIM14Q14142 442 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 PTK2BQ14289 1009 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 HLTFQ14527 1009 aaKnown RBP eCLIP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 PPP2R5BQ15173 497 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 ANKRD1Q15327 319 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 MYLK3Q32MK0 819 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 WIPI1Q5MNZ9 446 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 EXOSC6Q5RKV6 272 aaKnown RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 RNF220Q5VTB9 566 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 PAPD7Q5XG87 772 aaKnown RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 HAUS3Q68CZ6 603 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 RWDD4Q6NW29 188 aaKnown RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 GGT6Q6P531 493 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 LRFN4Q6PJG9 635 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 DHRS4L2Q6PKH6 230 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 DSTYKQ6XUX3 929 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 CCDC81Q6ZN84 652 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 ANKS3Q6ZW76 656 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 FRA10AC1Q70Z53 315 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 TRPM8Q7Z2W7 1104 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 PIGWQ7Z7B1 504 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 MRPL10Q7Z7H8 261 aaKnown RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 TTC6Q86TZ1 520 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 SPATA24Q86W54 205 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 SNX32Q86XE0 403 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 SFR1Q86XK3 245 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 TMEM139Q8IV31 216 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 HACE1Q8IYU2 909 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 IQCKQ8N0W5 287 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 LILRB2Q8N423 598 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 CSGALNACT2Q8N6G5 542 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 CCDC89Q8N998 374 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 MINDY2Q8NBR6 621 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 PIGOQ8TEQ8 1089 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 NOC3LQ8WTT2 800 aaKnown RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 PYROXD1Q8WU10 500 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 NAT14Q8WUY8 206 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 INPP5DQ92835 1189 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 ARHGEF2Q92974 986 aaKnown RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 CHMP6Q96FZ7 201 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 LTV1Q96GA3 475 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-219ENST00000542112 CEP95Q96GE4 821 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 LRGUKQ96M69 825 aa4.6□□□□□ -1.67
SNHG1-219ENST00000542112 BIRC8Q96P09 236 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms