RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.88□□□□□ -0.67
POLR1B-217ENST00000541869 CDY2AQ9Y6F7 541 aa10.88□□□□□ -0.67
POLR1B-217ENST00000541869 ITIH6Q6UXX5 1313 aa10.88□□□□□ -0.67
POLR1B-217ENST00000541869 NFKBIEO00221 500 aa10.88□□□□□ -0.67
POLR1B-217ENST00000541869 AP1G2O75843 785 aa10.88□□□□□ -0.67
POLR1B-217ENST00000541869 RHOBTB3O94955 611 aa10.88□□□□□ -0.67
POLR1B-217ENST00000541869 BYSLQ13895 437 aaKnown RBP10.88□□□□□ -0.67
POLR1B-217ENST00000541869 USP41Q3LFD5 358 aa10.88□□□□□ -0.67
POLR1B-217ENST00000541869 CARD6Q9BX69 1037 aa10.88□□□□□ -0.67
POLR1B-217ENST00000541869 NIF3L1Q9GZT8 377 aa10.88□□□□□ -0.67
POLR1B-217ENST00000541869 ABCC6O95255 1503 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 YDJCA8MPS7 323 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 MX2P20592 715 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 GEMIN4P57678 1058 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 MTA1Q13330 715 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 LAMB3Q13751 1172 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 EFHC1Q5JVL4 640 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 SLC27A1Q6PCB7 646 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 SMG7Q92540 1137 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 ULK4Q96C45 1275 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 PABPC5Q96DU9 382 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 AHCYL2Q96HN2 611 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 DCLK3Q9C098 648 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 SARS2Q9NP81 518 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 OLFML3Q9NRN5 406 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 CYP39A1Q9NYL5 469 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 HACD3Q9P035 362 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 MIF4GDA9UHW6 222 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 FZD9O00144 591 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 THOP1P52888 689 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 CUL1Q13616 776 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 TTC19Q6DKK2 380 aaPredicted RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 SPATA24Q86W54 205 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 FMR1NBQ8N0W7 255 aaPredicted RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 CHAMP1Q96JM3 812 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 RPRD1AQ96P16 312 aaPredicted RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 SPATA16Q9BXB7 569 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 KLC2Q9H0B6 622 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 MAN1C1Q9NR34 630 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 TLR8Q9NR97 1041 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 PARVAQ9NVD7 372 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 PGRMC1O00264 195 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 NVLO15381 856 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 SNX2O60749 519 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 INHBAP08476 426 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 RTP1P59025 263 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 SHC4Q6S5L8 630 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 PAWRQ96IZ0 340 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 TMEM60Q9H2L4 133 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 TMEM8AQ9HCN3 771 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 IL17RBQ9NRM6 502 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 UMODL1Q5DID0 1318 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 PPP1R12AO14974 1030 aaPredicted RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 FGF19O95750 216 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 ACO1P21399 889 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 CDC25BP30305 580 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 DEUP1Q05D60 604 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 LAMTOR4Q0VGL1 99 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 NOMO2Q5JPE7 1267 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 CELF3Q5SZQ8 465 aaKnown RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 C12orf50Q8NA57 414 aaPredicted RBP10.87□□□□□ -0.67
POLR1B-217ENST00000541869 SPACA7Q96KW9 195 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 DPH5Q9H2P9 285 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 FBXO44Q9H4M3 255 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 CLDND1Q9NY35 253 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 RNF14Q9UBS8 474 aa10.87□□□□□ -0.67
POLR1B-217ENST00000541869 P4HA2O15460 535 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 HLA-DRAP01903 254 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 ITGB3P05106 788 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 TLE2Q04725 743 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 FAM49BQ9NUQ9 324 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.86□□□□□ -0.67
POLR1B-217ENST00000541869 DDX56Q9NY93 547 aaKnown RBP10.86□□□□□ -0.67
POLR1B-217ENST00000541869 PCDHA13Q9Y5I0 950 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 KNDC1Q76NI1 1749 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 SIGLEC1Q9BZZ2 1709 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 IFT172Q9UG01 1749 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 SLC37A4O43826 429 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 DDHD2O94830 711 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 CAPN2P17655 700 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 TAF11Q15544 211 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 LRRC8DQ7L1W4 858 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 CDR2LQ86X02 465 aaPredicted RBP10.86□□□□□ -0.67
POLR1B-217ENST00000541869 MID2Q9UJV3 735 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 HIST1H2AGP0C0S8 130 aaPredicted RBP10.86□□□□□ -0.67
POLR1B-217ENST00000541869 HIST1H2ADP20671 130 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 VEGFBP49765 207 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 C21orf59P57076 290 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 NOP14P78316 857 aaKnown RBP10.86□□□□□ -0.67
POLR1B-217ENST00000541869 GIT2Q14161 759 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 GRIK5Q16478 980 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 SZRD1Q7Z422 152 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 OR6P1Q8NGX9 317 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 ATL2Q8NHH9 583 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 VPS50Q96JG6 964 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 HIST1H2AHQ96KK5 128 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 HIST1H2AJQ99878 128 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 H2AFJQ9BTM1 129 aa10.86□□□□□ -0.67
POLR1B-217ENST00000541869 PCSK1NQ9UHG2 260 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms