RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 LRRIQ3A6PVS8 624 aaPredicted RBP20.22■□□□□ 0.83
VPS33A-205ENST00000541169 F8W810 466 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 IRS1P35568 1242 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 NDUFV1P49821 464 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 DUSP6Q16828 381 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 ZACNQ401N2 412 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 CCDC40Q4G0X9 1142 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 TCEAL5Q5H9L2 206 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 METTL23Q86XA0 190 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 CEP57Q86XR8 500 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 EFHBQ8N7U6 833 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 OR5B17Q8NGF7 314 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 CXorf38Q8TB03 319 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 RIN2Q8WYP3 895 aaPredicted RBP20.22■□□□□ 0.83
VPS33A-205ENST00000541169 COG5Q9UP83 839 aa20.22■□□□□ 0.83
VPS33A-205ENST00000541169 N4BP1O75113 896 aaKnown RBP20.21■□□□□ 0.83
VPS33A-205ENST00000541169 OAZ2O95190 189 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 CYP11A1P05108 521 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 CA8P35219 290 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 BRCC3P46736 316 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 GUCY2FP51841 1108 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 BIRC3Q13489 604 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 COL19A1Q14993 1142 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 PSMD5Q16401 504 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 KRT39Q6A163 491 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 TMEM86AQ8N2M4 240 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 CCDC150Q8NCX0 1101 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 HPDLQ96IR7 371 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 FAXDC2Q96IV6 333 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 POP1Q99575 1024 aaKnown RBP20.21■□□□□ 0.83
VPS33A-205ENST00000541169 SRRTQ9BXP5 876 aaKnown RBP20.21■□□□□ 0.83
VPS33A-205ENST00000541169 IMPG2Q9BZV3 1241 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 GZF1Q9H116 711 aaPredicted RBP20.21■□□□□ 0.83
VPS33A-205ENST00000541169 THAP9Q9H5L6 903 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 VRTNQ9H8Y1 702 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 TMEM8AQ9HCN3 771 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 SIX4Q9UIU6 781 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 MAFFQ9ULX9 164 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 PTPRJQ12913 1337 aa20.21■□□□□ 0.83
VPS33A-205ENST00000541169 HIDE1A8MVS5 230 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 PMM2O15305 246 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 HUS1O60921 280 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 CAVIN2O95810 425 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 C4BPAP04003 597 aaKnown RBP20.2■□□□□ 0.82
VPS33A-205ENST00000541169 P4HA1P13674 534 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 STX17P56962 302 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 YWHAHQ04917 246 aaPredicted RBP20.2■□□□□ 0.82
VPS33A-205ENST00000541169 CETN1Q12798 172 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 MRPL58Q14197 206 aaKnown RBP20.2■□□□□ 0.82
VPS33A-205ENST00000541169 SGSM1Q2NKQ1 1148 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 RTP2Q5QGT7 225 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 ZNF280DQ6N043 979 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 TMEM184AQ6ZMB5 413 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 C15orf39Q6ZRI6 1047 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 RTL10Q7L3V2 364 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 TAS1R1Q7RTX1 841 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 TOP6BLQ8N6T0 577 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 LNX1Q8TBB1 728 aaPredicted RBP20.2■□□□□ 0.82
VPS33A-205ENST00000541169 ENOX1Q8TC92 643 aaKnown RBP20.2■□□□□ 0.82
VPS33A-205ENST00000541169 HDAC7Q8WUI4 952 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 ZNF516Q92618 1163 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 PABPC5Q96DU9 382 aaKnown RBP20.2■□□□□ 0.82
VPS33A-205ENST00000541169 SENP8Q96LD8 212 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 MTRRQ9UBK8 725 aa20.2■□□□□ 0.82
VPS33A-205ENST00000541169 PRRC2BQ5JSZ5 2229 aaKnown RBP20.2■□□□□ 0.82
VPS33A-205ENST00000541169 SZT2Q5T011 3432 aa20.19■□□□□ 0.82
VPS33A-205ENST00000541169 CNPP09543 421 aaKnown RBP20.19■□□□□ 0.82
VPS33A-205ENST00000541169 KLRC2P26717 231 aa20.19■□□□□ 0.82
VPS33A-205ENST00000541169 TKTP29401 623 aaKnown RBP20.19■□□□□ 0.82
VPS33A-205ENST00000541169 NRIP1P48552 1158 aa20.19■□□□□ 0.82
VPS33A-205ENST00000541169 DLG4P78352 724 aa20.19■□□□□ 0.82
VPS33A-205ENST00000541169 NCOA4Q13772 614 aa20.19■□□□□ 0.82
VPS33A-205ENST00000541169 VARS2Q5ST30 1063 aaKnown RBP20.19■□□□□ 0.82
VPS33A-205ENST00000541169 LMBRD2Q68DH5 695 aaPredicted RBP20.19■□□□□ 0.82
VPS33A-205ENST00000541169 SV2AQ7L0J3 742 aa20.19■□□□□ 0.82
VPS33A-205ENST00000541169 THEM5Q8N1Q8 247 aa20.19■□□□□ 0.82
VPS33A-205ENST00000541169 MICALL1Q8N3F8 863 aa20.19■□□□□ 0.82
VPS33A-205ENST00000541169 PLEKHO2Q8TD55 490 aa20.19■□□□□ 0.82
VPS33A-205ENST00000541169 KLHL5Q96PQ7 755 aa20.19■□□□□ 0.82
VPS33A-205ENST00000541169 ATG2AQ2TAZ0 1938 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 OR6C75A6NL08 312 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 C2CD2LO14523 706 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 CYB561D2O14569 222 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 P4HA2O15460 535 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 HYAL1Q12794 435 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 SMARCB1Q12824 385 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 TCERG1LQ5VWI1 586 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 TDRD10Q5VZ19 366 aaKnown RBP20.18■□□□□ 0.82
VPS33A-205ENST00000541169 OVOS1Q6IE37 1185 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 SLC8B1Q6J4K2 584 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 CASP10Q92851 521 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 EEF2KMTQ96G04 330 aa20.18■□□□□ 0.82
VPS33A-205ENST00000541169 FAM124BQ9H5Z6 455 aaPredicted RBP20.18■□□□□ 0.82
VPS33A-205ENST00000541169 MAGEC2Q9UBF1 373 aaPredicted RBP20.18■□□□□ 0.82
VPS33A-205ENST00000541169 PPEF2O14830 753 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 TEX28O15482 410 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 CLASP2O75122 1294 aaKnown RBP20.17■□□□□ 0.82
VPS33A-205ENST00000541169 LHX1P48742 406 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 MXI1P50539 228 aa20.17■□□□□ 0.82
VPS33A-205ENST00000541169 TNNC1P63316 161 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms