RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SSTR3P32745 418 aaPredicted RBP18.26■□□□□ 0.51
CD9-209ENST00000540891 MTHFRP42898 656 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 ROR1Q01973 937 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 ATAT1Q5SQI0 421 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 LMBRD2Q68DH5 695 aaPredicted RBP18.26■□□□□ 0.51
CD9-209ENST00000540891 DSTYKQ6XUX3 929 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 C15orf39Q6ZRI6 1047 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 RDH13Q8NBN7 331 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 OR5B17Q8NGF7 314 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 TIGD1Q96MW7 591 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 NECTIN4Q96NY8 510 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 POP1Q99575 1024 aaKnown RBP18.26■□□□□ 0.51
CD9-209ENST00000540891 GZF1Q9H116 711 aaPredicted RBP18.26■□□□□ 0.51
CD9-209ENST00000540891 DMAC2Q9NW81 257 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 DPP7Q9UHL4 492 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 CUL9Q8IWT3 2517 aa18.26■□□□□ 0.51
CD9-209ENST00000540891 MTCL1Q9Y4B5 1905 aaKnown RBP18.25■□□□□ 0.51
CD9-209ENST00000540891 SCN1AP35498 2009 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 WDR27A2RRH5 827 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 SPDYE4A6NLX3 237 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 H7C4K7 107 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 TULP1O00294 542 aaPredicted RBP18.25■□□□□ 0.51
CD9-209ENST00000540891 ZMYND10O75800 440 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 PAX3P23760 479 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 POLR2BP30876 1174 aaKnown RBP18.25■□□□□ 0.51
CD9-209ENST00000540891 TAF6P49848 677 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 CTXN3Q4LDR2 81 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 ZNF280DQ6N043 979 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 GOLGA5Q8TBA6 731 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 TMEM174Q8WUU8 243 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 ERCC4Q92889 916 aaPredicted RBP18.25■□□□□ 0.51
CD9-209ENST00000540891 CCDC47Q96A33 483 aaKnown RBP18.25■□□□□ 0.51
CD9-209ENST00000540891 RPGRIP1Q96KN7 1286 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 SENP8Q96LD8 212 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 RIPOR3Q96MK2 946 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 RHOBTB2Q9BYZ6 727 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 MTMR12Q9C0I1 747 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 INTS13Q9NVM9 706 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 ZDHHC7Q9NXF8 308 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 SIX4Q9UIU6 781 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 MAPK8IP1Q9UQF2 711 aa18.25■□□□□ 0.51
CD9-209ENST00000540891 C2orf16Q68DN1 1984 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 TSC2P49815 1807 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 PDXKO00764 312 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 ABLIM3O94929 683 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 ITGB3P05106 788 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 C8AP07357 584 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 TYMPP19971 482 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 YWHAHQ04917 246 aaPredicted RBP18.24■□□□□ 0.51
CD9-209ENST00000540891 CYP24A1Q07973 514 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 PSMD6Q15008 389 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 SURF1Q15526 300 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 ELMSAN1Q6PJG2 1045 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 SLC9A9Q8IVB4 645 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 ZNF461Q8TAF7 563 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 SPATA20Q8TB22 786 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 PLEKHO2Q8TD55 490 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 CACTINQ8WUQ7 758 aaKnown RBP18.24■□□□□ 0.51
CD9-209ENST00000540891 CCDC34Q96HJ3 373 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 TRAF3IP3Q9Y228 551 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 DENND4AQ7Z401 1863 aa18.24■□□□□ 0.51
CD9-209ENST00000540891 EXOC3O60645 756 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 CYP11A1P05108 521 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 TMEM191BP0C7N4 346 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 SP100P23497 879 aaPredicted RBP18.23■□□□□ 0.51
CD9-209ENST00000540891 ARPP19P56211 112 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 CYP26C1Q6V0L0 522 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 WDR49Q8IV35 697 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 SMYD4Q8IYR2 804 aaPredicted RBP18.23■□□□□ 0.51
CD9-209ENST00000540891 CSGALNACT2Q8N6G5 542 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 SLC7A14Q8TBB6 771 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 MFSD14AQ96MC6 490 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 PRKD2Q9BZL6 878 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 ITGA11Q9UKX5 1188 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 AGAP1Q9UPQ3 857 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 PCDHA5Q9Y5H7 936 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 NCOR1O75376 2440 aa18.23■□□□□ 0.51
CD9-209ENST00000540891 KPNA7A9QM74 516 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 C2CD4DB7Z1M9 353 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 NR3C1P04150 777 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 OR4Q2P0C623 313 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 ODC1P11926 461 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 HOXA9P31269 272 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 CASP4P49662 377 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 LIN9Q5TKA1 542 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 ELOA2Q8IYF1 753 aaPredicted RBP18.22■□□□□ 0.51
CD9-209ENST00000540891 GUF1Q8N442 669 aaKnown RBP18.22■□□□□ 0.51
CD9-209ENST00000540891 LRRC52Q8N7C0 313 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 SMG7Q92540 1137 aaKnown RBP18.22■□□□□ 0.51
CD9-209ENST00000540891 ZNF516Q92618 1163 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 CCDC127Q96BQ5 260 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 ZNF560Q96MR9 790 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 CGRRF1Q99675 332 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 RTP3Q9BQQ7 232 aa18.22■□□□□ 0.51
CD9-209ENST00000540891 CYB561D2O14569 222 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 SEC24AO95486 1093 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 VNN2O95498 520 aa18.21■□□□□ 0.51
CD9-209ENST00000540891 HNRNPA1P09651 372 aaKnown RBP eCLIP18.21■□□□□ 0.51
CD9-209ENST00000540891 DLATP10515 647 aaKnown RBP18.21■□□□□ 0.51
CD9-209ENST00000540891 ATF2P15336 505 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms