RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 SPATA6Q9NWH7 488 aaPredicted RBP15.37■□□□□ 0.05
SNHG1-213ENST00000540725 CEP72Q9P209 647 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 TBX20Q9UMR3 447 aa15.37■□□□□ 0.05
SNHG1-213ENST00000540725 TIMM13Q9Y5L4 95 aaPredicted RBP15.37■□□□□ 0.05
SNHG1-213ENST00000540725 OGTO15294 1046 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 LAMTOR5O43504 91 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 XPOTO43592 962 aaKnown RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 FAM189A1O60320 539 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 OAZ2O95190 189 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 PIGRP01833 764 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 SCP2P22307 547 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 TARSP26639 723 aaKnown RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 MAGEA9P43362 315 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 GUCY2FP51841 1108 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 ZNF131P52739 623 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 GRM2Q14416 872 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 MCM6Q14566 821 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 ENOX2Q16206 610 aaKnown RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 ZBTB41Q5SVQ8 909 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 LARP1BQ659C4 914 aaKnown RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 MYCT1Q8N699 235 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 BEST2Q8NFU1 509 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 DNASE1L2Q92874 299 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 ASB16Q96NS5 453 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 RPF1Q9H9Y2 349 aaKnown RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 PARVGQ9HBI0 331 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 ZFP14Q9HCL3 533 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 ASAH2Q9NR71 780 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 HEBP1Q9NRV9 189 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 YIPF1Q9Y548 306 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 MOSPD3O75425 235 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 BMP15O95972 392 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 KRT18P05783 430 aaKnown RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 CENPBP07199 599 aaPredicted RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 MYL4P12829 197 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 PLCG1P19174 1290 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 MCM2P49736 904 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 EPHA5P54756 1037 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 GRIN1Q05586 938 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 KARSQ15046 597 aaKnown RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 ZNF528Q3MIS6 628 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 DSTYKQ6XUX3 929 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 ZNF852Q6ZMS4 543 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 USP37Q86T82 979 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 LEMD2Q8NC56 503 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 RASSF8Q8NHQ8 419 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 RAD54LQ92698 747 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 SMARCD2Q92925 531 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 ZSWIM3Q96MP5 696 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 NELL2Q99435 816 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 OXCT2Q9BYC2 517 aaPredicted RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 BRD9Q9H8M2 597 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 UPF2Q9HAU5 1272 aaKnown RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 FBXO4Q9UKT5 387 aa15.36■□□□□ 0.05
SNHG1-213ENST00000540725 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.36■□□□□ 0.05
SNHG1-213ENST00000540725 NUP210Q8TEM1 1887 aaPredicted RBP15.35■□□□□ 0.05
SNHG1-213ENST00000540725 SPTBN2O15020 2390 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 A0A0B4J269 797 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 OR6C75A6NL08 312 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 PPEF2O14830 753 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 NCAM2O15394 837 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 TRAK2O60296 914 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 VNN2O95498 520 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 ADRB2P07550 413 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 OR4Q2P0C623 313 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 GJA1P17302 382 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 LONP1P36776 959 aaKnown RBP15.35■□□□□ 0.05
SNHG1-213ENST00000540725 ID4P47928 161 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 FOXK2Q01167 660 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 SLC39A4Q6P5W5 647 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 BRAPQ7Z569 592 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 CLDN23Q96B33 292 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 FAM212AQ96EL1 285 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 PGLYRP2Q96PD5 576 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 TSPAN18Q96SJ8 248 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 MSTO1Q9BUK6 570 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 TRMT61BQ9BVS5 477 aaKnown RBP15.35■□□□□ 0.05
SNHG1-213ENST00000540725 ZHX3Q9H4I2 956 aa15.35■□□□□ 0.05
SNHG1-213ENST00000540725 MRPS17Q9Y2R5 130 aaKnown RBP15.35■□□□□ 0.05
SNHG1-213ENST00000540725 SHISA7A6NL88 538 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 KINO60870 393 aaKnown RBP15.34■□□□□ 0.05
SNHG1-213ENST00000540725 TBCAO75347 108 aaKnown RBP15.34■□□□□ 0.05
SNHG1-213ENST00000540725 TYMPP19971 482 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 RPS9P46781 194 aaKnown RBP15.34■□□□□ 0.05
SNHG1-213ENST00000540725 CSTF1Q05048 431 aaKnown RBP15.34■□□□□ 0.05
SNHG1-213ENST00000540725 GPR17Q13304 367 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 PLD1Q13393 1074 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 SPATA1Q5VX52 437 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 OVOS1Q6IE37 1185 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 JADE1Q6IE81 842 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 VITQ6UXI7 678 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 MAP4K3Q8IVH8 894 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 CD302Q8IX05 232 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 SHKBP1Q8TBC3 707 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 IRF7Q92985 503 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 FIZ1Q96SL8 496 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 HINFPQ9BQA5 517 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 CRISPLD1Q9H336 500 aa15.34■□□□□ 0.05
SNHG1-213ENST00000540725 CPSF3Q9UKF6 684 aaKnown RBP15.34■□□□□ 0.05
SNHG1-213ENST00000540725 ZNF638Q14966 1978 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms